Bradyrhizobium daqingense: LPJ38_22000
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Entry
LPJ38_22000 CDS
T07756
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdg03009
]
LPJ38_22000
Enzymes [BR:
bdg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LPJ38_22000
Ribosome biogenesis [BR:
bdg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LPJ38_22000
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
FtsJ
Ubie_methyltran
Methyltransf_25
Methyltransf_5
MTS
Methyltransf_15
Methyltr_RsmF_N
Methyltransf_24
Cons_hypoth95
PCMT
PrmA
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
UFS86349
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Position
4681465..4682766
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AA seq
433 aa
AA seq
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MTPAARLSAAIELIDTIEKDRVPAAKALKEWGTAHRFAGSGDRAAIAGLVWDVLRRYASS
AWLMDADTARARLIGMLRLERDMDTATMAALCDGSRFAPAPLTEAEQAALASRSLADAPA
AVAGDYPEWLDSHLAKVFGEDRAAEAAAMASRAPLDLRVNTLKSNRDKVLRALAHLHAKP
AQWSATGLRIELSADARNPGIQAEEDFIKGGIEVQDEGSQLAAQFTAAKPGEQVIDLCAG
AGGKTLALAALMQGKGRLIATDRDKRQLAPIHERLSRAGVHNADIRTPKGDADPLSDIRA
SADLVVIDAPCTGTGTWRRNPDAKWRMRPGALEIRLRDQAEVLERAVPLVKPGGRIAYIT
CSVLSEENGEQVRAFVARHPEFAVVPPEQTASVLWDKAEAFGEAALQSDEGWLMTPRRTG
TDGFFVSVLRKAG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgctgcccggctgtccgcagccatcgaattgatcgacaccatcgagaaggac
cgcgtgcccgcggccaaggcgctgaaggagtggggcaccgcgcaccgctttgccggttcc
ggcgaccgcgccgccatcgccggcttggtctgggacgtgctgcgccgctacgcctccagc
gcctggctgatggacgcagacaccgcgcgggcgcgcctgatcggcatgctgcgcctcgag
cgcgacatggacaccgccaccatggccgcgctgtgcgacggcagccggttcgccccggcg
ccgctgaccgaggccgagcaagccgcgctcgcctcgcgctccctcgccgatgccccggcc
gcggttgccggcgattatcccgaatggctcgattcgcaccttgcaaaagtgttcggcgag
gaccgagccgctgaagccgccgcgatggcgagccgggccccgctcgacctgcgcgtcaac
acgctaaaatccaatcgggacaaggtgctgcgtgcgcttgctcatcttcatgcgaaaccg
gcgcaatggtccgcaaccggccttcgcatcgagctttcggccgatgcgcgcaaccccggc
atccaggccgaggaggatttcatcaagggcggaattgaagtgcaggatgagggatcgcag
cttgcggcccaattcaccgcggcaaagcccggcgagcaggtgatcgatctctgcgccggc
gccggcggcaagacgctggcgctcgcagccctgatgcagggcaagggccggctgatcgcg
accgatcgcgacaagcgccagctcgccccgatccacgaacgcctgtcgcgcgccggcgtc
cacaatgccgatatccgcacgcccaagggcgatgccgatccgctctccgacatccgcgcc
tcggctgatctcgtcgtgatcgacgcgccctgcacaggaaccggcacctggcgtcgcaac
cccgacgccaaatggcggatgcggccgggcgcgctggagattcgcctgcgcgaccaggcc
gaggtgctggagcgcgcggtccccctagtgaagccgggcggccgcatcgcctacatcact
tgctcggtgctgtcggaggagaacggcgagcaggtgagggcgttcgtcgcccgccatccc
gagttcgccgtcgtgccgcccgagcagaccgcgagcgtgctctgggacaaggcggaagcc
tttggcgaagccgcgctgcagtccgacgaaggctggctgatgacgccgcggcggaccggc
acggatgggtttttcgtctcggtgctgcggaaagcaggctaa
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