Brachypodium distachyon (stiff brome): 100821842
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Entry
100821842 CDS
T01717
Name
(RefSeq) protein transport protein Sec24-like CEF
KO
K14007
protein transport protein SEC24
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100821842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100821842
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100821842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
100821842
NCBI-ProteinID:
XP_003576050
UniProt:
I1ILS1
LinkDB
All DBs
Position
4:21703476..21717967
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AA seq
1094 aa
AA seq
DB search
MTPSSSSSPPPPFGAQNPSTPPGSGPGAAALQAPFSNMQISRASAPPPGAPRGLTPQAAP
PAAQVGNGPPSAYSARPSVIRGPATGPPAARPFPGSPPAPSQPSFVRPPTTSAGAPFGGP
PAAAFSQPPPFGGPPGAVSKQSIPFGGPMSRPGPPFGGPPAATSQAPPPSGGPPGAVSQP
PFGGSSTAWSQAAPPPFGVQRPALSGQPITTGAAPLQASPSLGAPQQQAPSFSGPPRFGG
PPPGMQPPFAAQSSSMSPQGPFTGPSRANVPAFGPPSRQSQGAFYGAMQPPMSTIPGGMP
PSMPGQGLPPPTTPTFPYSPHAGTQVSTPSKIDPNQIPRPMAETSVIIFETRQGGQASIP
PAASSEFIVKDTGNCSPRLMRCSVNQIPCTSDLLTSSGMPLSLMVQPFSLPHPSEEPIQL
VDFGEMGPVRCSRCKAYINAFMRFIDQGRHFICNLCGFSNDTPRGYLCNLGPDGRRRDAD
DRPELCKGTVEFVATKEFLVRDPMPALYFFLIDVSMNAVQTGATAAACSAISQAISDLPE
GPRTMVGIATFDSAVHFYSLKRAQQQPLMLIVPDVQDVYTPLQMDLILPISECRENLEQL
LESIPNMFENNRVADSAFGAAMKAAFLAMKSTGGKLLVFQSELPSVGVGSLSGREAEGRA
NVVSIGDKEPHKLLQPVDKTLKTMALEFAEYQVCVDVFLTTQSYVDIASISVVPNTTGGR
VYYYYPFSALSDPAKLFNDLRWNISRPQGFEAVMRVRCSQGLQVQDYFGNFCKRVPTDID
LPSIDSEKTVMVTFKHDDKLQENSECGFQCALLYTTVFGQRRIRVMNLSLQCTSMLSNLF
RYADSETQFACFLKQAANSIPTVPLPHLREEVTNTCINILQSYRKNCASVSSSGQLILPE
ALKLLPLYTLALIKSIGLRNEGRVDERSYWISVISSISVLLAVPFVFPRLISLHNLTSRG
DDESLIPSPLMLNSDNVHEDGVYLLENGEDGLIYVGDALDPAMLEQIFGVTSLTALPSQL
VFEQFDNEPSRKVNEVLNEIRRQRCSYLRLRLCRGGEPSGNFFRSFLVEDKAPGGLSYVE
FLVHVHRQIQSKMT
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgacaccctcgtcgtcgtcctcgccgccgccgccgttcggcgcgcaaaaccctagcacg
ccgcctggatcgggtccgggggctgctgctttgcaggcgccgttctcaaacatgcaaatc
tcccgagcctccgcgccgcccccgggggcgccccgcgggctcacgccgcaagcggctcct
ccggctgcgcaggtgggcaacggacccccgtctgcgtactccgcccggccgtcggtgatt
cgtgggccggcgacgggcccgcccgccgcccgccctttccccggcagcccgcccgcgccg
tcgcagccgtcgttcgtgaggcccccgactacgtcggccggcgcgccgttcggtgggcct
cctgcggctgcgttctcgcagccaccgcctttcggtggccctcctggggcagtctccaag
cagtctattcccttcggtggacccatgtcccggccggggcctccgttcggcggccctcca
gcggctacttctcaggcgccgcctccgtccggcggtcctcctggggcggtctctcagcct
cctttcggtgggtcttctactgcatggtctcaggcagcaccaccgccatttggtgtccag
cggccggcattatctggacagcctattacaactggggcagcgccattgcaagccagcccg
agtcttggggctccacagcagcaggcaccgtcgttcagtggccctccccgatttgggggt
ccgccaccaggtatgcagccaccttttgctgcacaatcatcatctatgtcaccgcagggg
ccattcaccggaccatccagggctaatgtaccggcttttgggcctccatctcggcagtca
cagggagctttctatggtgctatgcaaccacctatgtcgaccattcctggtggcatgcca
ccaagtatgcctgggcaagggttgcctcccccaaccaccccaacctttccatattccccc
catgctggaacccaggtctcaaccccatccaaaatcgaccctaatcaaattccacgacca
atggctgaaacatcagtcattatttttgagactcgtcaaggtggacaagcatccattcca
ccggctgcatctagtgaatttattgtgaaggacactgggaactgtagccctcgtttgatg
aggtgttctgtgaatcagataccttgtacaagtgatctcttaacatcatcgggcatgcct
ttgtctctgatggttcaacccttttctcttcctcacccatctgaggaacctattcagctt
gtggactttggagagatgggccctgtacggtgttctcgttgcaaagcgtacataaatgct
ttcatgagattcattgaccaagggcggcattttatctgtaatttatgtggatttagcaat
gatactcctagggggtacttgtgtaacttaggtcctgacggtagacggcgtgatgctgat
gacagacctgagttatgtaaaggaactgtggaatttgttgccaccaaggaatttctggtt
cgtgatccaatgcctgctctatatttcttcctaattgatgtctccatgaatgctgtacaa
actggcgcaactgctgcagcttgtagtgcaatttctcaggccatttctgatcttccggag
ggtcctcggacaatggttgggattgccacatttgattctgctgttcatttttacagtttg
aaacgtgctcagcagcagcctttgatgctcatcgttcctgatgtccaagacgtatataca
cctcttcaaatggacctgattctcccaatttctgagtgccgagaaaatctggaacagctg
ttagaaagcatccctaacatgtttgagaataatagggttgctgattctgcttttggagca
gctatgaaggctgccttcctggctatgaaatctactggtggaaagctacttgtttttcag
tcagagctgccatctgttggtgttggttctttatctggtagagaagctgaaggtagagca
aatgttgtttccattggcgataaggaaccacataaacttctgcagcctgttgataaaact
ctaaagacgatggcactagaatttgctgagtaccaggtctgtgtggatgtgttcctcact
actcaatcatatgttgatattgcttcaatatctgtcgttcccaataccacaggtggccgg
gtttactactactatccgttttctgctctttcagatcccgccaagctcttcaatgatctc
agatggaatatcagtagacctcagggttttgaggctgtcatgcgtgtccgctgcagtcag
ggcctccaagttcaagactattttggcaatttctgcaagcgtgttcctactgacatcgat
cttccgtcgattgactctgaaaaaactgtaatggtcacctttaagcatgatgacaagtta
caggaaaattcagaatgtggtttccagtgtgcacttctctacactactgtatttgggcaa
agaaggatacgggtcatgaacctctcacttcagtgcacaagtatgctcagtaatcttttc
cgatatgctgactcggaaactcagtttgcatgcttcttgaagcaagctgccaacagcatt
ccaacagttccactaccccatcttcgggaggaagtaacaaatacatgcataaatattctc
cagtcctaccgtaaaaactgtgcatctgtaagctcatccgggcagttgattctcccagag
gctctcaaactcctaccgttgtatactttagcactgatcaaaagcataggcttgcgaaat
gagggacgagtggatgagcgctcctattggatatctgtcatctcctcgatttctgttctg
ttggcggttccatttgtgtttccgagattgatttcactccataatctcacatcaagggga
gacgatgaatcccttatacctagtccccttatgctcaatagtgacaatgtgcatgaggat
ggagtttatttgttggaaaacggagaggatggtttaatttatgtaggtgatgcgctagac
cctgctatgctcgaacaaatatttggtgtgacttctttgactgcattgccaagccagttg
gtgttcgagcaatttgacaatgaaccctcgaggaaggtaaatgaagttttaaatgaaata
agacgccagagatgttcttacttgaggttgagactatgtagggggggtgaaccatctggt
aatttcttccgctcatttttggtagaggacaaggcgcctggaggcctttcctatgtcgag
ttccttgtgcacgtgcacaggcaaatccaaagcaagatgacatga
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