Brachypodium distachyon (stiff brome): 100821848
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Entry
100821848 CDS
T01717
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100821848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100821848
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100821848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
TPR_14
Motif
Other DBs
NCBI-GeneID:
100821848
NCBI-ProteinID:
XP_003557692
UniProt:
I1H4E8
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All DBs
Position
1:complement(58687217..58692866)
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AA seq
688 aa
AA seq
DB search
MADAVQYRLERMADELDDLERRGLFTDAELAEVVRRRRDFEFRLRRHSPLKADFLDYIAY
LLRVDALRGLRKRAIIRATPDPADDANNSDDDEDQEDGATKKRKRRKNKKKWAKSVSDYA
AVLRVLDVYRTATVRFKGDLDLWFQYLEFCRQKRHGRMKQVLAQAIRYHPKVPGLWIYAA
AWEFDQNLNVAAARALMQSGLRSCPESEDMWIEYLRMELTYLNKLKARKVALGENVKTLE
KDSDDAGHWKEENKELFMSLNEQGGSPDESGLQGVALEEKEDLFWQQGLLIIRTIYHGAM
EALPSSITLRKKILEILNSVELAHSEDLRLEVMNDLKKDFSHSEDYWDWFARLQLSDSTY
SSTSNEKEALSNKLDKSIQVYDEAVRKLPTSKMYSMYAKFWLGVLFSDREDSISLFHDAE
FDASEYTSSVLKVFKNAESCGCLTEDLACQYVSLCLKLGRLEEAPERLEEAKNLAEKLCN
GPLSKAANLWNLRASLEINSLATATGSLSFSEENLSSLFDLFNAVLLKLSIAEAEGLWHT
AMKLFSHDKRFFKKLVKSAMLSLSSAGGSDCGASVSSAIVGWVSQKDGIKQARKMYKRFL
ALPRPSLKFFQFCIELEANLASLGIDDAIANARKLYDSAINFYPQEREVWRNYYNMELKV
GTSETADAIYWRARKVLDDSTAITVPRS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcggtgcagtaccgcctggagcggatggcggacgagctggacgacctggag
cggaggggcctcttcaccgacgccgagctggccgaggtggtccgccgccgccgcgacttc
gagttccgcctccgccgccactccccgctcaaggccgacttcctcgactacatcgcctac
ctgctccgcgtcgacgcgctccgcggcctccgcaagcgcgccatcatccgcgccaccccg
gaccctgccgacgacgcaaacaactccgacgatgatgaagatcaggaggacggtgcaacg
aagaagaggaagaggcggaagaataagaagaagtgggccaagtccgtctccgactacgcc
gccgtcctccgcgtcctcgacgtctacaggacggccaccgtcaggttcaagggcgacctc
gacctctggttccagtacctcgagttctgccgccagaagcgccacggaaggatgaagcag
gttctggcacaagctattcgctaccatcccaaggttcctgggctttggatctatgcagca
gcatgggaatttgaccagaacttgaatgttgctgcagcgcgtgcacttatgcagagtggt
ctcagatcttgtccagaatcagaggatatgtggattgagtatcttcgcatggagcttacc
tatcttaacaagcttaaggctcgaaaggtagcccttggagagaacgtgaagacactggag
aaagacagtgatgatgcgggtcactggaaagaggaaaacaaagagctgttcatgtcactt
aatgaacaaggcgggagtcctgatgagtctggtttgcagggagttgctctggaggagaag
gaagatctattttggcaacaagggctgctaatcattcgcacaatatatcatggtgctatg
gaagctcttccgtcaagcataaccttgaggaagaaaattttggagatattaaatagtgtt
gagctggcacattctgaagacctgagattagaggtcatgaatgacctgaaaaaagatttc
tctcatagtgaggactactgggattggtttgctaggcttcagcttagtgactccacttat
tccagtacttcaaatgaaaaggaagctttgtcaaataagttggacaaatcaattcaggtg
tatgatgaagctgtcagaaagttgcctacctccaagatgtactccatgtacgcaaaattt
tggttgggtgttctgttctctgacagagaggattctatctcattattccatgatgctgaa
tttgatgcttcggaatacacttcatctgtactgaaagtttttaagaatgctgaatcgtgt
ggatgtctcactgaggatcttgcctgccaatatgtctctctttgtttgaaactaggacga
ttagaggaagcacctgaaagattggaagaagctaagaatcttgcagaaaaactctgcaat
ggtcctctttcaaaggctgcaaatctgtggaacctgagagcttctctagagataaactca
cttgcaactgctactggcagcctttcctttagcgaggagaacttgagttctctgtttgat
ctatttaatgctgtacttctgaagttgtccatagccgaggctgagggactgtggcatacg
gccatgaaactgttttctcatgacaagagatttttcaagaagctggtgaaatctgcaatg
ttatcattaagttcagctggcggtagtgattgcggagcatcagtttcttctgccattgtt
ggatgggtttcgcaaaaggatggtattaagcaagctaggaagatgtacaagagattcttg
gctttaccgcgccccagtcttaaattcttccagttctgcatagagctggaagctaacctt
gcatccctgggaatcgacgatgccattgcaaatgcgcgcaagctgtatgattcagcaatc
aacttctatccccaagaaagagaagtatggagaaactactacaacatggagttaaaggtg
ggaacatcagaaacggcagatgctatctactggcgcgctcgcaaggtgcttgatgactcc
actgcaatcaccgttccccgtagctag
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