Brachypodium distachyon (stiff brome): 100824378
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Entry
100824378 CDS
T01717
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03010
Ribosome
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
100824378
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100824378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bdi03011
]
100824378
04121 Ubiquitin system [BR:
bdi04121
]
100824378
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100824378
Ribosome [BR:
bdi03011
]
Ribosomal proteins
Eukaryotes
Small subunit
100824378
Archaea
100824378
Ubiquitin system [BR:
bdi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
100824378
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100824378
Exosomal proteins of colorectal cancer cells
100824378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
TBK1_ULD
DUF2604
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100824378
NCBI-ProteinID:
XP_003567648
UniProt:
I1HF29
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All DBs
Position
2:complement(10639103..10639954)
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AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDSTGKVTRLRK
ECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctcacgggtaagaccatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatcccaccggaccag
cagcggctcatcttcgccggcaagcagctggaggacggccgcaccctcgccgactacaac
atccagaaggagtccacgctgcacctggtgctccgactgaggggaggcgccaagaagcgc
aagaagaagacctacaccaagcccaagaagcaaaagcacaagcacaagaaggtgaagctc
gccgtcctgcagttctacaaggtcgacgactccaccggcaaggtcacccgcctccgcaag
gagtgccccaacgccgactgcggcgccggcaccttcatggccaaccacttcgaccgccac
tactgcggtaagtgcggcctcacctacgtctacaaccagaaggcgtag
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integrated database retrieval system