KEGG   Brachypodium distachyon (stiff brome): 100824378
Entry
100824378         CDS       T01717                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03010  Ribosome
bdi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    100824378
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100824378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:bdi03011]
    100824378
   04121 Ubiquitin system [BR:bdi04121]
    100824378
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100824378
Ribosome [BR:bdi03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    100824378
  Archaea
    100824378
Ubiquitin system [BR:bdi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   100824378
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100824378
  Exosomal proteins of colorectal cancer cells
   100824378
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD DUF2604 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 100824378
NCBI-ProteinID: XP_003567648
UniProt: I1HF29
LinkDB
Position
2:complement(10639103..10639954)
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDSTGKVTRLRK
ECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacgggtaagaccatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatcccaccggaccag
cagcggctcatcttcgccggcaagcagctggaggacggccgcaccctcgccgactacaac
atccagaaggagtccacgctgcacctggtgctccgactgaggggaggcgccaagaagcgc
aagaagaagacctacaccaagcccaagaagcaaaagcacaagcacaagaaggtgaagctc
gccgtcctgcagttctacaaggtcgacgactccaccggcaaggtcacccgcctccgcaag
gagtgccccaacgccgactgcggcgccggcaccttcatggccaaccacttcgaccgccac
tactgcggtaagtgcggcctcacctacgtctacaaccagaaggcgtag

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