Brachypodium distachyon (stiff brome): 100828265
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Entry
100828265 CDS
T01717
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g09900
Organism
bdi
Brachypodium distachyon (stiff brome)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
MRP-S27
ATP13
T7SS_EccA1_N
TPR_12
MA3
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
100828265
NCBI-ProteinID:
XP_003581269
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Position
5:complement(14701461..14704951)
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AA seq
587 aa
AA seq
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MLPSPSPPTLCTLVSSHSGHPSHSRRLSQILRSSNPNAPSFPKPNPDPPPPPPRRLHGED
RRLSSLVHRGELDAALRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAATA
VTYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLY
RGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDY
ARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVIS
SLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKP
NIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVF
KQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEED
KLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYS
ILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKNDASLLDQSIHTS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgtcgccatcccctcccaccctttgcactctcgtctcctcccactccggccac
ccctcccattcgcgacgtctatcccaaatcctacgtagctccaatcccaacgcgccgagc
ttcccaaagcccaaccccgacccacctccgccgccaccgcgccgtctgcacggggaagac
cgccgcctgagctcgctcgtccaccgcggcgaactcgacgcggcgctccgcgtcgtcgag
tcctcgctctgcccgcccgacgttgcgcttgccaacaggctcgtgcgcgacctctgccgc
cgcggccgccccgcggatgcggcgcgcgtcgtcgaggcgtgcggctccgcggccaccgct
gtcacatacagcgccctcgccgacggatactgccgcgtggggaggctcgacgaggcgcgc
cgcgtcgtggacggcatgcccgtgctgccaagcgcgtacgcctacaacccgctcatgcac
gcgctgtgtgtgcgcggccaggtcagggacgcgctcgtgttgctcgacaatatgctctac
cgggggtgcgcccctgacgtcgtcacctataacatcctcctcgaagcagcgtgtaagggt
agaggttaccggcaggccatggagctgatcgatctgatgcgcgtggagggttgcacgcca
accaatgtcacatacaatgttatcatggatggtatgtgcagagaaggcgatgtggactat
gctcgcgagttattgaacagcttgccttcttacgggtgcacgccgaacactgtcaactac
aacactgtcttgaaaggtttgcgtaccgctgggcggtgggaggatgttgaggagcttata
gctgagatgttcagcgagaattgtcccccgagtgaagcaactctcagtgtggtcatcagc
tccttgtgtcaagaaggattgttccagcgggcgattcggcttctcgagaaaatgtcaaag
catgattgcactgcaaatattgttacctacaatgctgtcgttagtgggctctgtgagcaa
ggccatgtggatggtgccttgtatttactaagcaacatgcaaaccgatggttgtaaacct
aatatcttcacgtataacattctagtgaagggtctgtgcaatgctgagcgatgggaggat
gctgaggacttaatggctaagatgagccaaactgattgcctcccagatattttgacattc
aatacaataattggtttcttgtgtcaaaaggggttgacgatgcaggctgttgaagtattt
aagcaaatgcccgagaaaggctgttgtcccaattcagtcacttacagttcagtaatagaa
gggcttgccaaaactggcaagatggaacaatccctcgagttattgaatgaaatgggcagc
aaaggattcaacccagagataaattatcatctgttagctgagtgtctgaatgaagaggat
aaacttgtggaggcgatccagatggttcataaactgcaagatacaggcatatcaccccaa
gctgttctctacaacacaatactcctagggctttgcagaaatggcaaaactgatcaagcc
attgacattttgtctaatatggtgtctgatggttgcatgcctgatgaatccacgtacagt
atactcattcaaggtttggcacatgagggctatatgaaggaggctagagaattgttaagt
acattgagttctagagatgttatcgttgacaatttgatcaagaatgatgcttcactgtta
gatcaaagtattcacacttcttaa
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