Brachypodium distachyon (stiff brome): 100829480
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Entry
100829480 CDS
T01717
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03030
DNA replication
bdi03420
Nucleotide excision repair
bdi03430
Mismatch repair
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100829480
03420 Nucleotide excision repair
100829480
03430 Mismatch repair
100829480
03440 Homologous recombination
100829480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdi03032
]
100829480
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100829480
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100829480
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100829480
MMR (mismatch excision repair)
100829480
DSBR (double strand breaks repair)
HR (homologous recombination)
100829480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Pertactin
Phage_TTP_13
Motif
Other DBs
NCBI-GeneID:
100829480
NCBI-ProteinID:
XP_003566421
UniProt:
I1HDZ6
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Position
2:complement(7348988..7351761)
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AA seq
107 aa
AA seq
DB search
MDTSSPSPFVNGETLKIFVGRRVRTVVQVQRNEGGVLVGQSTDGHQLTIRGATDAPESPH
YMEVIGIADSNQSIRAEVCTDFGENFDAGVFNGLCKLANETFKPLFL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcaagtccttcaccatttgtcaatggagagaccctgaagatttttgttggg
cgaagagtgcgcacagtagttcaagtccagcgcaatgaaggtggagttcttgtcgggcag
tccactgatgggcatcagttgaccatcagaggtgccactgatgcccctgaatcaccacac
tatatggaggttattgggatcgctgacagcaatcagtccatccgtgctgaagtttgcaca
gatttcggtgaaaactttgatgctggggtgttcaatggactgtgcaagcttgcgaatgag
acgttcaagccccttttcctgtag
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