Brachypodium distachyon (stiff brome): 100834023
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Entry
100834023 CDS
T01717
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00300
Lysine biosynthesis
bdi00470
D-Amino acid metabolism
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
bdi01230
Biosynthesis of amino acids
Module
bdi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
100834023
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
100834023
Enzymes [BR:
bdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
100834023
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Pox_Rif
Motif
Other DBs
NCBI-GeneID:
100834023
NCBI-ProteinID:
XP_003573060
UniProt:
A0A0Q3F4Y2
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All DBs
Position
3:complement(9559954..9567530)
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AA seq
504 aa
AA seq
DB search
MPPSPAKLNPHRQTLAMAAANLLSRSLLPSLNPNSATRSSSSSPALVSLRRHHGRSNPLC
ASLSTASPSLRPEAAASGEAPKRCFRRGDDGHLYCEGVRVEEAIAAAERTPFYLYSKPQV
VRNFTAYQEALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNELRLALRAGFDPT
RCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQV
HPYVATGNKTSKFGIRNEKLQWFLDSIKSYPNDIKLVGVHCHLGSTITKVDIFRDAAVLM
VNFVDEIRAQGFELEYLNIGGGLGIDYEHKDAILPTPMDLINTVRELVLSRDLTLIIEPG
RSLIANTCCFVNKVTGVKTNGTKNFIVVDGSMAELIRPSLYGAYQHIELVSSPSPDAELA
TFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEED
GSIGKIRHAETFDDYMKFFDGLSS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgtcccctgccaagctcaacccacacagacaaaccctagcaatggcggcggcc
aacctcctctcccgctccctcctcccgtcgcttaaccctaactccgccacccgctcaagc
agcagcagccctgcacttgtctccctgcgccgccatcacggacgctcgaaccccctatgt
gcctccctctccaccgcctccccgtccctgcggccggaggcggcagcctcgggggaggcg
cccaagcgctgcttccggcgcggagacgacgggcacctgtactgcgaaggggtacgggtg
gaggaggcgatagcggccgccgagcggacccccttctatctatacagcaagccgcaggtc
gtccgcaacttcaccgcctaccaagaagccttggaggggctccgctccatcgtggggtat
gccgtcaaggctaataacaacctccgcgtgctgcagctcctgcgggagctcggatgtggc
gccgttcttgtcagcggcaacgagctccgccttgcactccgggcaggatttgaccctacc
aggtgcatatttaatggaaatggaaagacattagaagatcttgttttagctgcagagagt
ggagtatttgtaaatatagacagtgaatttgacttggagaatatcgtcactgctgcaaga
gttgcaggaaagaaagtgcctgttttgctcagaataaatccagatgtggatccacaggtt
catccttatgttgccacgggaaacaaaacatccaaatttggaattcgcaatgaaaaattg
caatggtttttagactccatcaaatcatacccaaatgatattaaactggtgggtgttcat
tgccatcttgggtctaccattacaaaggttgatatatttagagacgctgcagttcttatg
gtgaactttgttgatgaaattcgagcacaaggttttgagttggagtacctgaatattgga
ggtggcttggggatagattacgagcacaaggatgcaatcttgcctacaccaatggatctt
atcaacacagtgcgagaattggttctctcgcgagatcttactcttatcattgaacctgga
agatccttgatcgctaatacttgctgctttgttaataaggtcactggtgttaaaactaat
ggtacaaagaatttcattgtggttgatggcagcatggcagagctcatcaggcctagtcta
tatggagcgtatcagcatatcgaactggtttcttctccgtctccagatgcagaattagca
acctttgatattgtggggccagtttgtgaatctgcagatttccttggcaaagatagggag
cttccaacacctgacaagggtgctggcctggttgtccacgacgcaggagcttattgcatg
agcatggcttccacctacaacctgaagctgagaccacctgaatattgggtagaagaagat
gggtccatcggtaagatcaggcatgcggagacatttgatgattacatgaagttcttcgat
ggtctctcttcctag
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