Brachypodium distachyon (stiff brome): 100839661
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Entry
100839661 CDS
T01717
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100839661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100839661
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100839661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Astro_1A
Motif
Other DBs
NCBI-GeneID:
100839661
NCBI-ProteinID:
XP_010239628
UniProt:
I1IVN4
LinkDB
All DBs
Position
5:1190809..1198168
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AA seq
1026 aa
AA seq
DB search
MHPPTGNERLPGRPVSGFVPGSAAAAGPPPFAAGAPLMRPGAAAPFAPPTQQPGVPPPLA
GASPAAPFGAAPPAAMGGYRGPPPPQGPFGTGPPPQGPFATASPPQGPFATASPPQGPFA
KAPPPQGPFAAAPPSQGPFAAGPPSQGPFAAGPPSQGPFATAPPPFRHPPSLGQPQSPTG
SGMPAPTYVRPPPVQSQPPPVQGYYPGVPSSNPQFPMSRPAYQPPMQTMPPPPMGPPSSY
SNQPAYPTSGPPMGTLQSLVEDFQSLSVSSAPGSLDPGVDVKGLPRPLDGDEEPAKVFEA
YPLNCHPRYFRLTTHTIPASQSLVSRWHLPLGAVVHPLAESPDGEEVPVVNFGSAGVIRC
RRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCALDASGRRYDTDQRPELSKGTVE
FVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFPRTQIGFLTF
DSTLHFHNFKSSLSQPQMMVVADLDDVFLPLPDDLLVNLVDSRHVVESFLDSLPNMFHDN
VNVESALGPALKAAFMVMGQIGGKLLVFQSTLPSLGIGRLRLRGDDVRAYGTDKEHILRV
PEDPFYKQMAAEFTKNQIAVDIFSFSDKYCDIASLGSLAKYTGGQVYHYPSFQATTHGEK
LKHELSRDLTRETAWESVMRIRCGKGVRFTTYHGHFMLRSTDLLALPAVDSDKAFAMQLS
LEETLMTTQAVYFQVALLYTSSSGERRIRVHTAAAPVVTDLSEMYRQADTGAIVSLLARI
AVENSLSDKLDSVRQQLQLKLVRSLKEYRNLYVVQHRIGGRLIYPESLRYLPLYILAICK
SLALRGGYADVSLDERCAAGFSMMILPARRLLNFIYPSLYRLDEVLTMEPGRIDGSLKRL
PLTLQCLDTAGLYLLDDGFTFLVWLGRMLPPELVNDILGVSLANFPDLSKIQLRECNNYH
SRNFMTVLRTLREKDFSCYQLPRVVRQGEQPREGFLLLSNLVEDQMAGTSSYMDWILQIH
RQTQSS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgcccacggggaacgagaggctgccggggcgccccgtgtccggcttcgtgcca
ggtagcgccgcggccgcgggccccccgccgttcgcggctggcgctccgcttatgcgcccc
ggagcagccgcaccgttcgccccgccgacgcagcagccgggcgtgccgcctccgctggcg
ggcgcttcccctgcggcgccgttcggggctgcgccgcccgccgcaatgggtgggtacagg
ggtccgccgccgcctcagggtcccttcggcactggaccgcctcctcaaggacccttcgcc
acggcatcgcctcctcaagggcccttcgccacggcatcgcctcctcaagggcccttcgcc
aaggcaccgccgcctcagggtcccttcgctgcagcgcctccgtctcagggcccctttgcg
gcggggcctccctctcagggcccctttgcggccgggcctccctctcagggcccttttgcc
acggcacctccaccgtttcgccatccgccgtctctcgggcagccacaatcccccacgggg
agtggcatgcctgcaccgacttatgtgaggccaccgcccgtgcaatcgcagccgccgcct
gtgcaagggtattaccctggtgtcccttcttcgaacccacagttccccatgtcccggcca
gcgtatcaaccgccaatgcagaccatgccgccgcctcccatgggtccaccttcctcttat
agtaaccagccagcatatcctacttccgggcccccgatgggcacactccagagcttagtg
gaggacttccagtctctatcagtgagttctgctcctggatcacttgacccaggtgtcgat
gtaaaagggctgcctcgtccattggatggtgatgaggagcccgctaaggtttttgaggca
tacccactgaactgccacccgaggtacttccggctgacaacccacactattccggcgtcc
cagtcattggtctccaggtggcacttgccccttggggccgtggtacatcctctagcagaa
tcacctgatggggaggaagtgccagttgtcaactttgggtcggctggggtaattcgttgt
cgaaggtgcaggacatatataaacccttacgcaacatttgcagatgctggaaggaaatgg
cgctgcaatctttgcacattgctcaatgatgttcctggtgagtacttttgtgctcttgat
gctagtggcagaagatacgatacagaccaaagaccagaactttctaaaggaacagtggag
tttgttgctcctactgaatatatggttcggccaccaatgccaccttcctatttctttctt
attgatgtctcagtatctgcagttcgaagtgggctgctagaggtggttgcgaagaccatt
aaatcatgccttgatgatcttctaggctttccacgaacacaaattggattcttaaccttt
gatagcacattacacttccacaatttcaagtcttctttgagtcaacctcaaatgatggtg
gttgccgatttggatgatgttttcctgccattgcctgatgatctcttggttaatttggtc
gattctagacatgttgttgagtcatttctcgatagcttgcccaatatgttccatgacaat
gtgaatgtagaatctgctcttggtcctgcacttaaagcagcattcatggttatgggtcaa
attgggggaaagttgcttgtcttccagagtacgctgccatcacttggtatcggtcgtttg
agacttcgaggagatgatgtccgtgcatatggaacagataaagagcatattctgagggta
ccagaagatcccttctataagcagatggctgctgagttcacgaaaaatcagattgcagtg
gatatattttctttcagtgacaagtattgcgacatagcttccttaggttctctggcgaaa
tatactggtggtcaggtgtaccattatccatccttccaggcaactactcatggggagaaa
cttaaacatgagcttagtagagaccttactcgggagactgcttgggaatctgtgatgcgt
atcagatgtggaaaaggggtgcgtttcacaacatatcatggtcacttcatgctaaggtcc
acagatttattagcacttccagctgtcgactctgataaagcttttgcgatgcaactgtct
ctggaggagaccctaatgaccacacaggctgtatacttccaagtggcattgctatataca
tcctcttctggtgaaagacgtatcagggtgcatacagcagctgcacctgtggtcacagat
cttagtgaaatgtatcgtcaagcagatactggtgccatcgtgtcattgttggctagaatt
gctgttgaaaactcattgtctgacaagctggacagcgttcgacaacaattacagttaaag
cttgtgagaagcttaaaggaataccggaacctatatgttgtacaacatcggataggaggg
agactgatatacccagaatcattaagatacttaccattatacatcctggccatatgcaaa
tctcttgctctccgtggtggttatgctgatgtctctcttgatgaacgttgtgctgctggt
ttcagtatgatgatactgcctgcaagaaggctgctcaattttatttatccttctctgtac
aggcttgatgaagtattaacaatggaaccaggcaggattgatgggtccctgaagcggttg
ccattaaccttgcagtgcctagacactgctggtttatatcttcttgatgatggtttcacc
ttcctagtatggttgggtaggatgctcccacctgagctcgttaacgacattcttggagtc
agcttggcaaacttccctgatctatcaaagatccagttgagagaatgtaacaactatcac
tcgagaaatttcatgacagtactaagaaccctaagggagaaagatttttcttgttaccag
ctaccccgtgtggtacggcaaggtgagcagcccagagaaggtttcttgctcctgtccaac
ctcgttgaggatcagatggctggaacaagtagttacatggactggatactccaaattcac
cgccaaacacaaagctcgtga
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