Brachypodium distachyon (stiff brome): 100846002
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Entry
100846002 CDS
T01717
Name
(RefSeq) ubiquitin-like protein ATG12 isoform X1
KO
K08336
ubiquitin-like protein ATG12
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100846002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100846002
04121 Ubiquitin system [BR:
bdi04121
]
100846002
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100846002
Membrane trafficking [BR:
bdi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100846002
Ubiquitin system [BR:
bdi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
100846002
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100846002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
Motif
Other DBs
NCBI-GeneID:
100846002
NCBI-ProteinID:
XP_003570522
UniProt:
I1IEM0
LinkDB
All DBs
Position
3:56698432..56700639
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AA seq
95 aa
AA seq
DB search
MASAAAEAADQKVVVHVRNTGDAPVLKQTKFKISGREKFLKVIEFLRRQLHQDTLFVYIN
SAFSPNPDELVIDLYNNFAIDGKLVVNYALSAAWG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgccgctgaggcagccgatcagaaagtcgtggtccacgtgcgcaacacc
ggcgatgcgccggtgctgaagcaaaccaagttcaagatttcaggaagagagaagttttta
aaggtcattgaatttcttcgccgacaacttcatcaggatacactgtttgtctatatcaac
agtgcattttcaccaaacccagatgagctggtaattgacttgtataataacttcgcgatt
gacggaaagcttgtggtcaattatgctttgtcagcagcatggggttaa
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