Brachypodium distachyon (stiff brome): 104582996
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Entry
104582996 CDS
T01717
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104582996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
104582996
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104582996
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104582996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
104582996
NCBI-ProteinID:
XP_010232939
UniProt:
A0A0Q3MDQ1
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Position
2:1172565..1174547
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AA seq
273 aa
AA seq
DB search
MRKQAAAEAAGSSGKKAKQAEVVKTVSPKTMVAIDPKLLQCGVCSGLLVPPIFQCTKGHI
TCSKCCPVVNNGCSLCKGLEDATRCHAMERLLGDLTVPCSFRARGCTEMILYSETLAHAQ
SCLYAPCYCPIAGCGIYAGRPSLHDHIMQDHPMLRYMVVPGVASALTMYHGDPACLVSLS
SDGEMFLIVVTDDRSALAPGQSLSVIHLARKVVTRYYRIEVRTKAGLLLLYSEAQDVRRL
MRAYEPTSSLFVSDAMWGPKDSPVRVDINIHPV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcaggctgcggcggaggcggcggggagctcggggaagaaggctaagcaggcc
gaggtggttaagactgtttctcccaagaccatggtcgccatagaccccaagttgctgcag
tgcggagtctgttccggcctattggttccacccattttccagtgcaccaagggccacatc
acatgctcaaagtgctgccccgtggtcaacaacggctgcagcttgtgcaaaggtcttgag
gatgccacccgctgccacgccatggagcgcctccttggtgacctgaccgtgccgtgttca
ttcagagcacgcggctgcaccgagatgatcttgtactcggagacgctggcccatgcacag
tcctgcctctatgccccttgctactgccccatcgccggctgtgggatctacgccggcaga
ccatcactgcatgaccacatcatgcaggatcacccgatgctccggtatatggtcgtgccc
ggcgttgctagtgcactgaccatgtatcacggcgatccggcctgcctggtgtcccttagc
tcagacggggagatgttcctcatcgtcgttaccgacgatcgtagcgcactggcgccgggg
cagtcgctgtctgtgatccacctcgcgcgcaaggtggtcacccgttattacaggatcgag
gtgcgcaccaaggcaggcctcctcttgctgtacagcgaggcacaggacgtcaggcggctg
atgagggcttacgagccaacctcatccctcttcgtgtcagatgccatgtggggccccaag
gactctcccgttcgtgtcgacattaatatccatccggtatag
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