KEGG   Brevundimonas diminuta: EQG53_09620
Entry
EQG53_09620       CDS       T05851                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bdm  Brevundimonas diminuta
Pathway
bdm03030  DNA replication
bdm03430  Mismatch repair
bdm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EQG53_09620
   03430 Mismatch repair
    EQG53_09620
   03440 Homologous recombination
    EQG53_09620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdm03032]
    EQG53_09620
   03400 DNA repair and recombination proteins [BR:bdm03400]
    EQG53_09620
Enzymes [BR:bdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EQG53_09620
DNA replication proteins [BR:bdm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EQG53_09620
DNA repair and recombination proteins [BR:bdm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EQG53_09620
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QAT16109
UniProt: A0A381ALD5
LinkDB
Position
complement(1912714..1913328)
AA seq 204 aa
MHAVAIDFETANEQRASPCSIGLAWINDGVIESVEHHYIRPPGMRFASFNIAFHGIGPEQ
VEDAEEFPAVLAAIAPRLEGRTVLAHNAAFDVSVIRNTCDHYGLTYPEFDYLCTVKLAQI
SWPEFPSHKLNNVCAELGVAFRHHDAAEDAFACASVALAAAQVHQAADCRALADASRLTM
GRVWRDGYSACSNAGTRPRRPRGG
NT seq 615 nt   +upstreamnt  +downstreamnt
atgcacgccgtcgccatcgacttcgaaaccgccaatgagcagcgggccagcccctgctcc
atcggcctggcctggatcaacgacggcgtcatcgaatccgtcgagcaccactacatccgc
ccgccggggatgcgtttcgccagtttcaacatcgccttccacggcatcggccccgaacag
gtcgaagacgccgaggagttccccgccgtcctggccgccatcgccccgcgtctcgaaggc
cgcaccgtgctggctcacaacgccgccttcgacgtcagcgtcatccgcaacacctgcgac
cactacggcctgacctatcctgagttcgactacctctgcaccgtcaagctggcccagatc
agctggcccgagtttccctcgcacaagctgaacaacgtctgcgctgaactgggcgtcgcc
ttccgccaccacgacgcggccgaagacgccttcgcctgcgcctccgtggccctggcggcg
gcgcaggtgcatcaggcggccgactgccgcgccctggccgacgccagccgcctgaccatg
ggccgcgtctggcgcgacggctattcggcctgctccaacgccggaacccgcccccgccgt
ccgcgcggcggctga

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