Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1346
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Entry
BBDE_1346 CDS
T04222
Name
(GenBank) isoprenyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00900
Terpenoid backbone biosynthesis
bdn01100
Metabolic pathways
bdn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BBDE_1346
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bdn01006
]
BBDE_1346
Enzymes [BR:
bdn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BBDE_1346
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BBDE_1346
2.5.1.29 geranylgeranyl diphosphate synthase
BBDE_1346
Prenyltransferases [BR:
bdn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BBDE_1346
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BAQ27340
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Position
1587229..1588308
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AA seq
359 aa
AA seq
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MSSSTDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLT
LDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALASG
THSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAV
ELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLAMSIGLPLGLA
FQLADDLLDVIGSSLNTGKPVGGDIREGKRTVLLADALSGADEPERAELIGMWEAPSRCE
EQVRRAITLFASTGAIERSHGRIRNLWNASKSIIDALDVPDDRKELLIRACARFVPTVV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctccacggatttggaacagatcgagtcccgcattgtcgaattggtgaaggat
ttcgtcacgccgcatgccgacgatgcggtggcttcctcctgcaaagacgtcgccgatgcg
gtggcccgtcaggcggtcacgtccagcgaaggcggcaaaaggttgcgcgcgttgctgacg
ctggattccttccgcgtattcgccgccgatgccgctaaggaggccgatttcgacgcggtg
ttggatctggcctgcgcggttgaggtgttccagaccgctgccttggtgcacgacgacatc
attgatgactccgatttgcgccgcggcaggccgtccgcgcatcgggcactagcttccggc
acgcatagcgatgcgataggacgtggcctgggcatcatgttgggagacatgctcgcgaca
tccagcgtggatatcgccaaccgtgcggcacgtcgcctgtcacgttccgatgatgtggtc
ggcgcgtttctgaccatgcatcgcgaggtggagatcggacaggtgctggatcttgccgtg
gagttgaatccgctggatgatcccgaggaactggtccgtgcctcattgaacgtgttccgt
tggaagaccgccagttataccaccatcgcccctttggaattcggcatgctcgccgcagga
ttggatgcctccgccgctcgcgaccttgccatgtcgatcggcctgccgttaggtctggcg
ttccagcttgcggacgatttgctggacgtgatcggctcaagtctcaacaccggcaagcct
gtcggcggagacattcgtgagggcaagcgtaccgtattgctggccgacgccctcagcggc
gccgacgagccggaacgtgcggagcttatcggcatgtgggaagcgccatcccgctgcgag
gaacaggtgagacgggccatcacgctgtttgcgtcaacaggagccatcgaacgttcccat
ggtcggattcgtaatctatggaacgcctcgaaaagcatcatcgacgcgttggacgtgcca
gatgaccgcaaggagttgctgatcagggcctgtgcgcggttcgtgccgaccgtcgtctag
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