Bdellovibrio sp. ZAP7: DOM22_03725
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Entry
DOM22_03725 CDS
T06441
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bdz
Bdellovibrio sp. ZAP7
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdz03016
]
DOM22_03725 (thpR)
Enzymes [BR:
bdz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DOM22_03725 (thpR)
Transfer RNA biogenesis [BR:
bdz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DOM22_03725 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QDK44327
UniProt:
A0A514XFL3
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All DBs
Position
complement(749201..749809)
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AA seq
202 aa
AA seq
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MNKRLFFALNATNPLSTTFLPTYKKLKINADQKELVIKWVPPENFHVTVTFLGETPEDSI
PALSQALQDACEQTKPFDLKVDDISAFSSEHDARTLWLGVQNKKALGEFKDRLDEILKER
NLLRFIDKRDFTPHLTIARLRNPKSVKDMISPFKRKSFGKIHVSEIVLYESKLAGAFPVY
KPVFRATLIGKDQDENSIATEE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgcctgttctttgctttgaacgcgacgaatccactttcgacaactttcttg
ccgacctacaaaaaattgaaaatcaatgcggatcaaaaagaactagtgatcaaatgggtt
ccgcctgaaaactttcacgtcactgtaacttttctgggggaaacgccggaagacagcatc
ccggctttgagtcaggccctgcaggatgcctgtgaacagacaaaacccttcgatttaaaa
gtcgacgacatcagtgcgttttcctcggagcacgatgcgcgcacattatggttaggcgtt
cagaacaaaaaagctctgggtgagtttaaagatcgcttggatgagatcttgaaagaaaga
aatctgctgaggtttattgataaacgcgatttcacgcctcacctgacgatcgcgcgcctg
cgcaatccgaaaagtgtcaaagatatgatttcaccgttcaagcgtaagagctttgggaaa
attcacgtctccgaaattgttttgtatgaatcaaaacttgcgggagcttttccggtatac
aaacccgtgtttcgcgcgactttaattggcaaagaccaagacgaaaattccatcgccact
gaagaatag
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