Bdellovibrio sp. ZAP7: DOM22_07360
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Entry
DOM22_07360 CDS
T06441
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOM22_07360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdz03019
]
DOM22_07360
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DOM22_07360
Messenger RNA biogenesis [BR:
bdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DOM22_07360
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_25
AAA_22
UvrA_inter
PhoH
Motif
Other DBs
NCBI-ProteinID:
QDK44994
UniProt:
A0A514XI59
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Position
complement(1476500..1477768)
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AA seq
422 aa
AA seq
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MAKFSDYGLLGSLVKTLKSNQITNPTEIQNNAIPTLMGGQSVVGVAETGSGKTLAYALPL
LHALKSLEDAGQEVTENSRPRAVVMVPTRELGEQVSKVFKTLTHDTRLRVRPALGGMAME
QARRNTSGPFEILLATPGRLIQMMNLKYIDLTDVRMLVFDEADQMLDQGFISDSNNIYYA
CPTEVQLALFSATVSPAVQELINGMFAKAELYRSAGAGKTVKTLVTQNRIVKDGRRWPLL
EKILKEPADGGTILFANTREQCDKLAQELSDNGYAAVIYRGEMEKAERRSNLKKFTEGKV
KLLVATDLAGRGLDIPNVDRVINYHLPKQKENYLHRAGRTARAGRKGVVINFVTERDERF
IADLEGRKLPEDRDKTKFNSRAKPPVKASGKNTGGNKLSKPGSRPGKPMTKPAPKPKSRT
RK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattttctgattacgggctcttaggttcattggttaagactttaaaatcgaat
caaattacgaatcccacggaaattcaaaataacgcgattcccactttgatgggtgggcaa
tcggtggtgggcgttgccgaaaccggcagcggtaaaaccttggcttacgccctccccttg
cttcacgcattgaaatcccttgaagacgcaggtcaagaagtgacagaaaactcccgtcca
cgcgccgtagtgatggtcccgacccgtgaactgggtgagcaggtttccaaagtttttaaa
actttgacccatgatactcgtctgcgagttcgtcctgcattgggtggtatggcgatggag
caagcacgtcgtaatacttctggtccttttgagatcttgctcgcaactccgggccgtctg
attcagatgatgaaccttaagtacatcgatttgacagatgtgcgcatgctggtttttgac
gaagccgatcagatgcttgatcaaggattcatttctgattcaaataatatctattacgcc
tgcccgacagaagttcaactggcactgttttcagcaactgtctccccggcagttcaagaa
ctgattaacggaatgtttgcgaaagcagagctttaccgcagtgcgggcgctggaaaaact
gtcaaaactttggtgacgcaaaatcgcattgttaaagacggccgccgttggccgctatta
gaaaagattttgaaagaacctgctgatggcggaactattctgttcgcgaacactcgtgag
caatgcgataagctggcccaggagctttccgataacggttatgccgccgtgatttatcgc
ggggaaatggaaaaggccgagcgccgttcgaatcttaaaaaattcactgaaggcaaagtg
aagctgttagtggcaacagatctagccggtcgtggtttggatattccaaatgtagatcgc
gtgatcaactaccatctacccaagcaaaaagaaaactatctgcaccgcgcaggccgtacc
gcccgggccggtcgcaaaggtgtggtaattaactttgtcacagaacgtgacgaacgcttt
atcgcagatcttgaaggcagaaaacttccggaagaccgggacaaaaccaaattcaattcc
cgtgcgaaaccgccggtgaaagcttctgggaaaaatacgggtggcaacaaactcagcaaa
ccaggcagtcgacctggaaaacctatgaccaaaccagcaccaaaaccaaaatctcgcact
aggaagtaa
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