Barrientosiimonas endolithica: GCM100_35750
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Entry
GCM100_35750 CDS
T09132
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bei
Barrientosiimonas endolithica
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bei03021
]
GCM100_35750
Transcription machinery [BR:
bei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCM100_35750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_psq
DUF134
HTH_17
HTH_28
RWP-RK
HTH_59
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BDZ59918
LinkDB
All DBs
Position
3424933..3425499
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AA seq
188 aa
AA seq
DB search
MADTAPLDERSDRDLLAQHCAGDPDAFGELFRRHKDRMWAVALRTCRDPELAADAVQDGF
ISAFRRADSFRGDSQVTTWLHRIVVNACLDRIRRIKPTSELPEYDLADRHDHHGSVDVRL
DVQEALARIPEGQRMALTLVDMHGMSVAEAAEVLDVAEGTIKSRCARGRSALAELLRDKH
GEGYPLTG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccgcgccgctcgacgagcggtccgaccgggacctgctggcgcagcactgc
gccggtgacccggacgcgttcggcgagctgttccgccggcacaaggaccgcatgtgggcg
gtggcgctgcgcacctgccgcgaccccgagctggccgccgacgccgtccaggacggcttc
atctcggccttccgccgcgccgacagcttccgcggcgactcccaggtgaccacctggctg
caccggatcgtcgtcaacgcctgcctcgaccggatccgccggatcaagcccaccagcgag
ctcccggagtacgacctcgccgaccggcacgaccaccacggctcggtcgacgtgcggctc
gacgtccaggaggccctggcccgcatccccgaggggcagcggatggccctcaccctcgtc
gacatgcacgggatgagcgtggccgaggccgccgaggtgctcgacgtcgccgagggcacc
atcaagtcgcggtgcgcccgcggccgcagcgcgctcgccgagctgctgcgcgacaagcac
ggtgagggatacccgctgaccggatga
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