Bacteroides fragilis BOB25: VU15_17125
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Entry
VU15_17125 CDS
T03897
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VU15_17125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_17125
Enzymes [BR:
bfb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VU15_17125
DNA repair and recombination proteins [BR:
bfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VU15_17125
Prokaryotic type
VU15_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PHTB1_C
Motif
Other DBs
NCBI-ProteinID:
AKA53256
UniProt:
A0A0K6BY29
LinkDB
All DBs
Position
4201703..4202365
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AA seq
220 aa
AA seq
DB search
MNVQIEESWKTHLEPEFEKDYFRTLTEFVRSEYSQYQIFPPGKLIFNAFNLCPFDKVKVV
IIGQDPYHGPGQAHGLCFSVNDGVAFPPSLVNIFKEIKEDIGTPAPSTGNLTRWAEQGVL
LLNATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEERENLVFILWGSYAQKKGAFIDRNKH
LVLSSAHPSPLSAYNGFFGNKHFSKTNEYLKAHGKTEINW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacaaatagaagagagctggaaaactcatttagaaccagaatttgagaaggat
tatttccgcacactgactgaatttgtcagaagtgaatatagccagtatcagatctttccc
ccgggaaagttgatattcaatgcattcaatttatgtccgtttgataaagtaaaagtagtc
attatcggtcaggacccctaccatggtcccggtcaggcacacggcctttgtttctcggtg
aatgacggagtagcctttccgccttctctggtgaacattttcaaagaaataaaagaagat
atcggcacgccagccccgtccaccggtaacctgacaagatgggctgaacagggcgtcctg
ttgctgaacgccaccctgacagtacgcgcccaccaggccggttcacaccaacgtcgcggt
tgggaagagtttacagatgctgccatccgtgtcctggccgaagaaagagaaaatctggta
ttcatcctttggggaagttatgcacaaaagaaaggtgccttcattgaccgtaacaagcat
ttggtactcagttcggcacatccctctcccctctctgcctacaatggcttctttgggaat
aagcatttcagtaaaacaaacgaatacctgaaagcccatggaaaaacagaaataaactgg
taa
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