Bacillus freudenreichii: NCTC4823_00993
Help
Entry
NCTC4823_00993 CDS
T06767
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC4823_00993 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_00993 (uvrB)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC4823_00993 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC4823_00993 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
P-loop_SecA
AAA_7
AAA
AAA_25
DUF87
AAA_19
AAA_22
AAA_6
AAA_5
AAA_16
Pannexin_like
Motif
Other DBs
NCBI-ProteinID:
VEF46997
LinkDB
All DBs
Position
1:1063536..1065512
Genome browser
AA seq
658 aa
AA seq
DB search
MKNEFELVSKYKPAGDQPKAIEHLVEGFQTGKKYQTLLGATGTGKTFTVSNMIKEVNKPT
LVIAHNKTLAGQLYSEFKDFFPNNAVEYFVSFYDYYQPEAYVPQTDTFIEKDSSVNDEIN
RLRHSATSALFERNDVIIIASVSCIYGLGSPEEYRDHVLSLRTGMEIERNQLLRRLVDLQ
YARNDIEFTNGTFRVRGDVVEIFPIAREEQCIRVEFFGDEIDRIRVVDALTGEIVGDREH
AAIFPASHYVTGEEKLRTAIKNIEMELEEQLAVLRAEEKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGATPFTLMDYFPDDFQIIVDESHVTLPQIRGMYNGDQARKQV
LVDHGFRLPSALDNRPLMFEEFEKHINHIVFVSATPGPYELEKTPEMVEQIIRPTGLLDP
NIDVRPIEGQIDDLLGEINDRIEKNERVLVTTLTKKMSEDLTDYLKDVGVKVQYLHSEVK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNSNGHVIMYADKMTDSMEKAISETKRRRSIQEEYNAKHGITPTTIQKDVRDVIRATM
AAEDTEEYVYENTKKLTKKEKDKLITSMEKEMKEAAKALDFERAAQLRDAILELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacgagtttgaattagtatcgaaatataagccagctggcgaccagccaaaggcg
atcgagcatctagtcgaaggcttccaaacagggaagaagtatcaaacgcttttgggagcg
acaggcacaggcaagacattcactgtctcaaatatgatcaaagaggtgaacaagccaacg
cttgtcattgcgcacaacaagacgcttgcaggacagttgtacagcgaattcaaagatttt
tttcctaacaatgccgttgagtattttgtcagtttttatgactattatcagccggaggca
tatgttccgcagactgatacgttcattgaaaaagattcgagtgtgaatgatgaaatcaat
aggttgaggcactcagcgacgtccgctttgtttgaacggaacgacgtcatcatcattgca
agtgtttcctgcatatacggcctcggttcgccggaggaataccgggatcatgtcctgtcg
cttaggacaggaatggaaattgaacggaaccagcttttgcgaaggcttgtcgatctgcaa
tatgctcgaaacgacatcgaatttacgaatggaacgttccgcgtccgcggagatgttgtc
gagattttccctattgcccgtgaagagcaatgtatccgggttgaatttttcggagatgaa
atcgaccggatccgtgtagtggacgcgttgaccggagagattgtcggtgaccgtgaacat
gcggccattttccctgcctcccactacgtgacaggtgaagagaaattaaggactgccatt
aaaaatatcgaaatggaattggaagagcagctggctgttcttcgtgccgaggaaaaattg
ctggaagcccagcggcttgagcagagaacgcgctacgacttggaaatgatgcgggaaatg
ggcttttgttccgggattgaaaactattcccgccatttgaccttgaggcctccgggagca
acaccttttacgttaatggactattttcctgacgattttcaaattatcgtagatgagtcc
catgttacgctcccgcaaatccgcggaatgtacaacggggaccaggcccggaaacaggtg
ctggtcgaccacggtttccgcctgccgtccgcgcttgataaccgtccgctcatgttcgaa
gagttcgagaaacatattaaccatatcgtgtttgtatctgccacgccaggaccgtatgaa
ttggagaaaacaccggaaatggtcgagcagatcattcgcccgacaggactgctcgacccg
aacatcgatgtccgccctatcgaagggcagattgatgacctgcttggggaaattaatgac
aggatcgaaaagaatgagcgtgtcctcgttacgacactgacgaaaaaaatgtctgaggat
ttaacggattatttaaaggatgttggggtaaaggttcagtatttacattctgaagtcaaa
accctggaacggattgaaattattcgagatttgagactcggaaaatacgatgtcctcgta
gggattaaccttcttagggaaggactggatatacctgaggtgtctctggtggctatcctt
gatgcggataaagagggtttcttgcgttccgagcgttcgctcatccagacgattgggcgg
gctgcgcgaaattcaaacgggcatgtgatcatgtatgccgataaaatgaccgactccatg
gaaaaggcaatttcggaaacgaaacggagacgctccatccaggaagaatataacgcgaag
catggcattacgccgacaacgatccaaaaggatgtccgcgatgtgatccgtgctacgatg
gcagcagaggatacggaagaatacgtttatgaaaatacgaaaaaattaacgaaaaaggaa
aaagacaagctgatcacttcaatggaaaaggaaatgaaagaagcggcaaaagcgcttgat
ttcgaacgcgcggcccagcttcgcgacgcaatattggagttgaaagcggaaggatga
DBGET
integrated database retrieval system
