Butyrivibrio fibrisolvens: CIY_20010
Help
Entry
CIY_20010 CDS
T02581
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bfi
Butyrivibrio fibrisolvens
Brite
KEGG Orthology (KO) [BR:
bfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfi03032
]
CIY_20010
03400 DNA repair and recombination proteins [BR:
bfi03400
]
CIY_20010
Enzymes [BR:
bfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CIY_20010
DNA replication proteins [BR:
bfi03032
]
Prokaryotic type
DNA Topoisomerases
CIY_20010
DNA repair and recombination proteins [BR:
bfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIY_20010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
CBK74707
LinkDB
All DBs
Position
complement(1837088..1839013)
Genome browser
AA seq
641 aa
AA seq
DB search
MAKKVTYDESSIAVLEGLEAVRKRPGMYIGSTSRKGLNHLIYEIVDNSVDEHLAGECDTI
YVTLEKDGSCTVEDNGRGIPVGMHAKGVPAARLVFSTLHAGGKFDDSVYKTSGGLHGVGS
SVVNALSEYMVVDISRDGFVHHDRYERGVPTEKLVDGLLPKISKTNKHGTKINFLPDAEI
FEKTYFKEDEVKSRLHETAYLNPGLTINYADLRGETPEYITYHEPEGIKGFVKEINKTAE
TLHDVVYFSGKCDDVELEVAFQYCNEFKENILGFCNNIYNSEGGTHITGFKTVLTTVINN
YARELGILKDKDANFTGADVRNGITAIVSIKHPDPRFEGQTKTKLDNPDASKATQKVCQD
EFVLFFDRNLETLKAIISCAEKSAKIRKSEEKAKTNLLTKQKFSFDQNGKLANCESRDAE
KCEIFIVEGDSAGGSAKKARNRMYQAIMPIRGKILNVEKASMDKVLANAEIKTLINAFGC
GFSEGYGNDFDITKLRYDKIVIMADADVDGAHISTLLLTFFYRFMPELIREGHVYIAMPP
LYKAIPTKGEEEYLYDDVALERYRKKMEGKTFTLQRYKGLGEMDAEQLWETTLDPERRKL
KLVEIEDGLMASEVTELLMGSDVAPRKQFIYKHAKEAELDV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaggttacctatgatgaaagcagtattgctgttttagagggacttgaggcg
gttagaaagcgccctggaatgtatattggttccacatcacgaaagggtctcaatcatctt
atttacgaaatcgtagacaactctgttgatgagcatcttgcaggcgagtgtgatactatt
tacgttacccttgaaaaggatggcagctgtacagtggaggataatggacgaggcattcca
gttggtatgcatgcaaagggagttcctgctgcacgtcttgtcttttctacactacacgca
ggtggaaagtttgacgatagcgtttacaaaacatcaggtggtttgcacggtgtaggttcg
tctgttgtaaatgcgctgtctgaatatatggttgtagatatttctcgtgatggatttgtt
caccatgatagatacgagagaggtgttcctacagaaaagcttgtagatggccttcttcca
aaaatttcaaagacaaataagcacggtacaaaaatcaatttccttccagatgcagaaatc
tttgagaagacatatttcaaggaagatgaggtaaaatctcgtcttcatgagactgcatat
cttaatccaggactcactatcaactatgcagatttacgaggtgagactccagagtatatt
acataccacgagcccgaaggaataaagggatttgttaaggaaatcaataagactgctgag
actcttcacgatgttgtttactttagtggtaaatgcgatgatgttgagcttgaggttgcc
ttccagtactgcaacgaatttaaggaaaacatccttggattctgtaacaacatatacaat
tccgaaggcggtacacacatcactggtttcaaaacagtacttactacagttattaataat
tatgcccgtgagcttggaattttaaaggataaagacgccaactttaccggtgcggatgta
cgaaatggtatcacagcaatcgtttctataaagcacccagatcctcgttttgagggacaa
accaaaacaaagcttgataatcctgatgcatcaaaggctactcaaaaggtttgccaggat
gaatttgttttattcttcgatagaaatcttgaaacattaaaggctattatttcctgcgct
gaaaagagtgctaagattcgtaaatccgaagagaaggctaagacaaatcttcttacaaag
caaaaattctcttttgatcagaacggaaagctggcaaactgcgaatcacgtgatgctgaa
aaatgcgaaatctttatcgttgagggagattccgctggtggttcagcaaagaaggctaga
aatcgtatgtatcaggctattatgcctattcgtggtaagattcttaatgttgaaaaggct
tcaatggacaaggtacttgccaatgctgaaattaagacccttattaatgcctttggctgt
ggcttctcagagggatacggcaatgactttgatatcacaaagcttcgctatgacaagatt
gtaattatggccgatgccgacgtggatggtgctcatatcagcacacttcttcttaccttc
ttctatagatttatgccagagcttattagagaaggacacgtttatatcgctatgcctcct
ctttacaaggctattcctacaaagggagaggaagaatatctctatgatgatgtggcccta
gagagatatcgcaagaagatggaaggaaaaactttcacacttcaaagatacaagggtctt
ggtgagatggatgcagagcagctttgggagactactttggatccagaacgtcgtaagctt
aagcttgttgaaatcgaagatggtcttatggcatctgaggttacagaacttcttatgggt
agcgatgttgctccacgtaaacagtttatatataagcacgcaaaagaagctgaattagac
gtatag
DBGET
integrated database retrieval system
