Paraburkholderia fungorum: OI25_1094
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Entry
OI25_1094 CDS
T03799
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OI25_1094 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_1094 (uvrA)
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OI25_1094 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OI25_1094 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
nSTAND1
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND3
RsgA_GTPase
AAA_21
AAA_22
AAA_25
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AJZ57623
UniProt:
A0A2T1B3L2
LinkDB
All DBs
Position
1:1257498..1260371
Genome browser
AA seq
957 aa
AA seq
DB search
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPEETRLMILAPVVANRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGVAKIYEVDSLPKLKKNDKHTIDVVVDRLKVRGDMKQRLAESFETALRLADG
RAIALEMDTDKEHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYEFDIDTAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRTSVREHVFEGIIPNLERRYRETDSVAVREELAKYQNNQPCPACAGT
RLRREARFVRIGSDGDARGIFEISGWPLRDALGYFQTLRLEGSKREIADKVVKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
ATLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANAASMT
GQYMSGARCIEFPDERKEPDERRLRIVEAYGNNLQHVSLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVAHHLYGSSTEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYEAGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVENAYEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAKSKASFTGRYLAPLLKRTASRK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaaatccgtatccgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ctcccacgtcacaagcttgtcgtgattacgggcctgtccggctcgggtaaatcgtcgctc
gcgttcgacacgctctatgcggaaggccagcggcgttacgtcgaaagtctttcggcttac
gcccgccagttcctgcaattgatggagaagccggacgtcgatctgatcgaaggcctgtcg
ccggccatctcgatcgagcagaaagcgacttcgcacaatccgcgctccacggtcggcacc
gtcaccgaaatccacgactatctgcggctattgttcgcccgggtcggcacgccgtactgt
ccggatcacgaaattccgctggaagcgcaaagcgtctcgcagatggtcgacgcggcgctc
gccctgccggaagagaccaggctgatgattctcgcgccggtggtggcgaaccgcaagggc
gagcacgtcgaactgttcgaggagatgcaggcgcagggcttcatccgttttcgcgtgcgc
tcgggcggcggcaccgccaatgaaggcgtcgcgaagatctatgaagtcgactcgctgccg
aagctgaaaaagaacgacaagcatacgatcgacgtcgtcgtcgaccgtctgaaggtgcgc
ggcgatatgaagcagcgcctcgccgagtcgttcgaaacggcgctgcgcctcgccgacggc
cgggccatcgcgctggaaatggacacggacaaggagcatctgttcagctcgaagttcgcc
tgcccgatctgctcgtattcgctgcaggagctggagccgcgcctcttctcgttcaataac
ccgatgggcgcttgcccggaatgcgacggcctcggccagatcaccttcttcgatccgaag
cgggtcgtcgcgcatccgtcgctgtcgctggcggcaggcgcggtgaagggctgggaccgg
cgcaatcagttttacttccagatgctgcaaagtctcgcggcgttctacgagttcgacatc
gacacggccgtcgaagacctgccggagaaggtccgcaagattctgctgttcggttcgggc
aagcaggaaattccgttctcgtacatcaacgagcgcggccgcacttccgtgcgcgagcat
gtgttcgaagggatcatcccgaatctggagcggcgctaccgcgagaccgattcggtcgcg
gtgcgcgaggaactggcgaagtatcagaacaaccagccctgcccggcctgcgccggcacg
cggctgcgccgggaagcccgtttcgtgcggatcggctcggacggcgacgcgcgcggcatc
ttcgaaatcagcggctggccgctgcgcgacgcgctcggctatttccagacgttgcggctc
gaaggctcgaagcgcgaaatcgccgacaaggtagtcaaggaaatcgtcgcacggctgatg
ttcctgaataacgtcgggctcgattacctgtcgctcgaacgcagcgcggaaacgctctcg
ggtggcgaagcgcagcgcattcgcctcgcctcgcagatcggctccggcttgaccggcgtg
atgtacgtgctggacgagccgtcgatcggtctgcatcagcgcgacaacgaccggctgatc
gccacgctcaagcatctgcgcgacctgggcaactcggtgatcgtcgtcgaacacgatgaa
gacatgatccgcatggcggactacgtggtcgacatgggccccggcgcgggcgagcacggc
ggcatggtgatcgccgagggcacgccgaagcaggtgcaggcgaacgcggcgtcgatgacc
gggcagtacatgtccggcgcccgctgcatcgaattcccggacgagcgcaaggaaccggac
gaacggcgtctgcgcatcgtcgaggcgtacggcaacaacctgcagcacgtctcgctcgat
ctgccggtgggcctcctgacttgcgtgaccggcgtgtccggctcgggcaagtccacgctg
atcaacgacacgctgtaccacgcggtcgcgcatcacctgtacggctcgtctaccgagccg
gcaccgtacgaatcgatcgaaggcctggagcatttcgacaaggtcatcaacgtcgaccag
tcgccgatcggccgcacaccgcgctcgaatccggccacctacacgggtctgttcacaccg
atccgcgaactgttcgcgggcgtgccggcagcgaaggaacgcggctacgaagcgggccgc
ttctcgttcaacgtgaagggcggccgctgcgaatcctgccagggcgacggcgtgctgaag
gtggaaatgcactttctgccggacgtctacgttccctgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgatgtgcagtacaagggcaagaacatcagcgaagtgctcgac
atgacggtggagaacgcctacgagttcttcaagccggtcccggtcgtcgcgcgtaagctg
aaaaccttgctggacgtgggtttgggctatatccggctgggccagtcggccaccacgctg
tcgggcggcgaggcgcagcgcgtcaaactatctttggaactgagcaagcgggataccggt
cgcacgctatacatcctggacgagccgaccaccggtctgcactttcatgacatcgcattg
ctgctggaagtcattcatcgtttgcgagaccagggtaataccgtcgtgatcatcgagcat
aatctcgatgtaataaagaccgccgactgggtcatcgatctcggccccgagggcggtgcc
ggcggcggccagatcattgcgcaaggcacgccggagcaggtcgccaagtcgaaggcaagt
tttaccggcaggtatctggcgccgctattgaaacgcactgccagcagaaagtaa
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