Bombilactobacillus folatiphilus: MOO45_03685
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Entry
MOO45_03685 CDS
T08484
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
bfp
Bombilactobacillus folatiphilus
Pathway
bfp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MOO45_03685 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfp03400
]
MOO45_03685 (uvrC)
DNA repair and recombination proteins [BR:
bfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOO45_03685 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH_5
GIY-YIG
UVR
HHH
AbiGii_2
5_3_exonuc
HHH_2
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
UQS82755
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Position
714730..716541
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AA seq
603 aa
AA seq
DB search
MATEYLEHKLALLPDRPGCYLMKDINAKIIYVGKAKNLKNRVRSYFKSSHEGKTAKLVSE
IRDFETIVTSTNKEAFLLEITLIQKHQPYFNIKLKKGTGYPYIKLTNERDPKMIITGQIK
KDGGFYFGPYPNVYAAEETLNFLQKVYPLRRCNGYQGRPCLYYHMGQCLGACFKEIPEEK
YAQQIKHIKSFLNGNVKTVKKQLTQKMDAAAQDLKFERAAELRDQIHYIEQTVEKQKIIS
NDRTPRDLFNFYVDKGWISIQVFFIRQARLMKREKRIFPCIGTPEEELATFILQFYNRKN
NVLPREILVPEDVDQESLSSILHVPFRTPQRGVKHDLLKMAHDNAQLSLEEKFRLMELDN
RQTVGAQKQIFDALCLPYGHVIESFDHSHIQGADAVSAMISFVDGQPAKANYRKYKIKDI
LEQHNGADESANTREVIYRRYSRLLKEHKPLPDLILMDGGLIELRVILDVLHNELGIHIP
VAGMVKDDHHSTSHLITGEQGQIVPLDRKSQGFYLLQRIQDEVHRFAITFHRQTHSKNAL
SSQLESVKGVGPKTRIKLLKHYGSVKKIKDAPIDDLMKLGISQTTAQAIKLSLSVTPVRK
IGK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaatatttagaacataaactagcgttacttcccgatcgtccaggatgttat
ttgatgaaggatattaatgctaaaattatttacgttggtaaagccaaaaatctcaaaaat
cgtgttcggtcttattttaaaagttcccatgaaggtaaaaccgcgaaattagtcagtgag
atccgtgattttgagactattgtgacttccacaaataaagaagcgtttttgttggaaatt
accttaattcaaaaacatcaaccttattttaatattaaactgaaaaagggtaccggttat
ccttatattaaactgactaatgaacgtgatccgaagatgatcatcacaggccaaatcaaa
aaagatggtggattctattttggtccatatcctaacgtgtacgcagctgaagaaacgtta
aattttttgcaaaaagtttatccgttgagacgttgtaacggatatcaaggtcgaccgtgt
ttatattatcatatgggtcaatgtttgggtgcttgttttaaagagatacctgaggaaaaa
tacgcgcaacaaattaagcatattaaaagttttttgaatggcaatgtaaaaacagttaag
aagcaattgactcaaaagatggatgctgctgcacaagatttaaagtttgaaagagcagca
gaactacgcgatcaaattcattatattgagcagacagttgagaaacaaaaaattatttct
aatgatcgtactcctcgcgatttatttaatttttacgtggataaaggctggatttccatt
caagtcttttttattcgtcaggcccgcttgatgaaacgagaaaaacgaatttttccttgt
attggtacaccagaagaagaattagcaacttttattttgcaattttataatcgtaaaaat
aatgtattaccacgggaaattttagttcctgaagatgttgatcaagaatctttaagttca
attttacacgttccatttcgaacaccgcaaagaggcgtgaagcacgatttattaaaaatg
gcgcatgataacgcgcaactttcgttagaagaaaaatttcggttaatggagttagacaat
cgacagacagtcggtgcacaaaagcagatttttgatgcattgtgtttgccatatggacat
gtgattgaatcctttgatcattcacatattcagggggctgatgcggtatcagcgatgatt
agttttgtcgatggtcaaccagctaaagcaaattatcgtaaatataaaattaaagatatt
ttggagcaacataatggtgcagatgaatcagctaatacacgagaagttatttatcgtcgc
tattcgcgtttgttaaaagaacacaagccgctaccagatttgattttgatggatggtggc
ttgattgaattgcgagtgattttggatgtattgcataatgaattagggatccatattcct
gtggcggggatggttaaagatgatcatcacagtacatcgcatttaattactggtgagcag
ggacaaatagtgccgttagatcgtaaaagtcaagggttttatttattacaaagaatccaa
gatgaagttcaccgatttgcgattacttttcatcgtcaaacacacagtaaaaatgcttta
tcttcacaattggaaagtgttaagggggtaggtcccaaaacgcgaattaaactattaaag
cattatggttctgtcaaaaaaattaaagacgctcccattgatgatttgatgaaattaggg
atttcacaaacgactgcacaggcaattaaactgtcattgtcagtgacaccagttcgcaaa
attggtaagtag
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