Brevundimonas fontaquae: JX001_14700
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Entry
JX001_14700 CDS
T09174
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bfq
Brevundimonas fontaquae
Brite
KEGG Orthology (KO) [BR:
bfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfq03021
]
JX001_14700 (rpoH)
Transcription machinery [BR:
bfq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JX001_14700 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
HTH_3
HTH_11
HTH_19
GntR
Sigma70_r4_2
DUF3431
Motif
Other DBs
NCBI-ProteinID:
QSF53985
LinkDB
All DBs
Position
3026295..3027182
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AA seq
295 aa
AA seq
DB search
MAANSTLAVMSPEQGLSRYLTEIRKFPMLTKDEEFMLAKRWSEHQDPEAAHRLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFDADKGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRKAKSQISAFEEGDLHPEHLAAIATKLGVTEEEVTNMNRRL
GGDASLNAPLRADGESEWQDWLADDTAVSQETQLADDEEKGIRMSLLQEAMEELTDREKH
ILTERRLKDDPVTLEELAGQYGVSRERVRQIEVRAFEKLQKAMRAAAEERNLVDA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaatagtacgctcgcggtgatgtcgcctgaacaaggcctgtcgcgttatctg
acggaaatccgcaagtttccgatgctgaccaaggacgaggagttcatgctcgccaagcgt
tggtctgagcaccaggaccctgaagccgcccaccgtctcgtcacctcgcaccttcgtctc
gtggccaagatcgccatggggtatcgcggctacggcctgccgatcggcgaagtgatttcc
gagggcaacgtcggcctgatgcaggccgtcaagaagttcgacgccgacaagggcttccgc
ctggcgacctacgccatgtggtggatccgcgcctcgatccaggagtacatcctgcgcagt
tggtcgcttgtgaagatgggcaccaccgcggcgcagaagaagctgttcttcaacctgcgc
aaggccaagagccagatctcggccttcgaggaaggcgatctgcatcctgaacacctcgcc
gccatcgccaccaagctgggcgtgacggaggaagaggtcaccaatatgaaccgccgtctc
ggcggcgacgcgtcgctgaacgccccgttgcgggccgacggcgaaagcgagtggcaggac
tggctggccgatgacacggccgtgtctcaggaaacccagcttgccgacgacgaggaaaaa
ggcatccgcatgagcctcctccaggaggctatggaagagctgaccgaccgtgagaagcac
atcctcacggaacgccgcctcaaggacgacccggttacgctggaagagctcgccggccag
tacggcgtgtcgcgcgaacgcgtgcgtcagatcgaggtccgcgccttcgagaagctgcaa
aaggccatgcgcgccgccgccgaagagcggaacctggtcgacgcctga
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