Bacteroides fragilis NCTC 9343: BF9343_3163
Help
Entry
BF9343_3163 CDS
T00239
Symbol
recQ2
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BF9343_3163 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfs03019
]
BF9343_3163 (recQ2)
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_3163 (recQ2)
Enzymes [BR:
bfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF9343_3163 (recQ2)
Messenger RNA biogenesis [BR:
bfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BF9343_3163 (recQ2)
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BF9343_3163 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
CAH08944
UniProt:
Q5LAC9
LinkDB
All DBs
Position
3823486..3825309
Genome browser
AA seq
607 aa
AA seq
DB search
MNEKYQMIQTLKTYFGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEG
TAIVISPLISLMKDQVETLRANGIPAGALNSSNDETENANLRRACISGQLKLLYISPEKL
LSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKI
TREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAIIDFITRHRGESGIIYCM
SRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSN
VRWVIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDLILLTKFATESNQQNINLEK
LNRMQQYAESDICRRRILLSYFGETTTEDCGNCDVCRNPPERFDGTIIVQKALSAIARTN
QQVSITLLIDILRGNPTTEITEKAYTELKTFGAGRDIPARDWQDYLLQMLQMGYFEIAYN
ENNHLKITGSGSDVLFGRKKAMLVVIRREEPATAKRRKKSAATPTQAWAEESRSKEEDLF
EALRALRKQLADQEALPAYIVLSDKVLHLLCLSRPTTVEAFGNINGIGEYKKKKYGKDFV
ALIRQFV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaatatcaaatgatacagaccctcaaaacttatttcggttatgatagcttc
cgtcctttgcaggaagagatcatccacaacctgataagtaaaaaagactcactggtattg
atgcctacggggggaggcaaatcaatctgctatcagcttccggctctgcttatggaaggc
acagccattgttatttcgccccttatttcactgatgaaggatcaggtagagactctacgt
gccaacggaataccggcaggtgcactaaacagcagcaatgacgaaaccgaaaatgccaac
ttacgcagagcctgcatctcaggacaacttaagctcctctacatctcgcccgagaaatta
ctatctgaagccgactatctgctgagagacatgactctctcactgtttgcagtggacgag
gcccactgtatttcacaatgggggcatgacttccgcccggaatatgcccggatgggattc
ttacgcaaccagttccccaatgtgcctatgatcgccctgactgctacggcagataaaatt
accagggaggatatcgtccgccagttgcaattgagacaaccgcaaatatttatttcatcg
ttcgaccgccccaacctgagcctgtctgtaaaaagaggctatcaacccaaggagaaaagt
aaagcgatcatagatttcattacccgtcacaggggggaaagcggaatcatctactgcatg
agccgtagtaagaccgaaacagtggcacagatgctgcaaaagcacggcatccgttgcggt
gtgtatcatgccggattgtccgcccggcaacgcgacgagacacaggacgacttcatcaac
gaccggatagaggtggtatgtgccactatcgctttcggaatgggtatcgacaaatcaaat
gtgcgctgggtgatacattataacctacctaaaagcatcgaaagcttttatcaggaaatc
ggccgtgccggacgcgacggcatggcaagcgacactatcctgttctactcattgggtgac
ttgattctactgacaaagtttgcaacggagagtaaccaacagaatatcaatctggaaaaa
ttaaaccggatgcaacaatatgccgaatccgacatctgccggcggcgtatcctcttaagt
tatttcggcgaaacgactacggaagattgtggcaactgtgatgtatgccgaaatccaccc
gagcggttcgacggcaccatcatcgtccagaaagccttaagtgccattgcccgcaccaac
cagcaggtaagcatcactctcctgatagacattctgaggggaaacccaacgactgaaatc
acagaaaaagcatatacagaattgaaaacgttcggagccggaagagacatccccgcacgt
gactggcaggattatctgttgcaaatgctgcaaatgggttacttcgagatagcctacaac
gaaaacaatcacctgaaaataacagggagcggcagtgacgttcttttcggccgtaaaaag
gcaatgctggttgtcatccgcagagaagagcctgcaactgccaaaagaagaaaaaagagt
gcagccacccccacacaagcatgggcagaagaaagcagaagcaaagaagaagacctgttc
gaagcattgcgcgcattacgcaaacagttggccgatcaggaggcactcccggcttacatc
gtattgtcggataaagtattgcatctgctctgtctgtcacgtcccacgacagtcgaagcc
ttcggtaacatcaacgggattggtgaatataaaaagaaaaagtacggaaaagattttgtt
gccctgatccgtcagttcgtatag
DBGET
integrated database retrieval system
