Blastomonas fulva: B5J99_07315
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Entry
B5J99_07315 CDS
T05612
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bfw
Blastomonas fulva
Pathway
bfw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5J99_07315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfw03021
]
B5J99_07315
03400 DNA repair and recombination proteins [BR:
bfw03400
]
B5J99_07315
Enzymes [BR:
bfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5J99_07315
Transcription machinery [BR:
bfw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5J99_07315
DNA repair and recombination proteins [BR:
bfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5J99_07315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
YqfD
Motif
Other DBs
NCBI-ProteinID:
ASR51305
UniProt:
A0A222WZ81
LinkDB
All DBs
Position
1558813..1563024
Genome browser
AA seq
1403 aa
AA seq
DB search
MNELTKFNNPAVKPETFDEIQIGLASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGIVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFESYVVIEPGLTSLEKYQLLTEDELLDAQDEFGEDAFSAG
IGAEAVRQMLMDLDLESERADLLQELETTKSELKPKKIIKRLKVVESFIDSGNRPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRIITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMDREGEPGEGMLMADIAEVHQALEI
GAVTLHSKVIARVPQTDEQGNQYLKRYNTTPGRMLIGECLPKSHKVPFDVVNRLLTKKEI
GDVIDQVYRHTGQKDTVLFADAIMGLGFRHACRAGISFGKDDMIIPDSKERLVDETRALV
ADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVANAMMEEIKATPKDEHGREAPVNSIYMM
SHSGARGSPAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLAD
TALKTANSGYLTRRLVDVSQDCVIVQEDCGTENALEMRAIVQGGSVIASLGERILGRTLA
EDISDAKTGEIVIAKDTLLDEANIATIEALGLQAARIRSPLICEATMGVCGKCYGRDLAR
GTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSNLEAVADGTLQYRDIPTI
VNKRGQRLSLARNGEIAIVDKEGRERAVHRIPYGTVLLVDDNGVVNLGDRIAEWDPFTMP
VITEKGGVVKYQDLIDGKTLIEQTDDATGIAQRVVVEFRGSLKAKSKEDLRPRLTLLDDD
SGEAARYMLAVGAMLSVEEGQKVEAGDVLARVSREAAKTRDITGGLPRVAELFEARKPKD
NAIIAKVSGRIEFVRDYKAKRKIAIHPEEGESVEYLVPKSKVIDVQEGDYVKKGDNLISG
SPDPHDILEVLGVEALAEYLVSEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDGGDTT
LLPGEQLDREEMDEYNGRLDAGKKFAEGKPVLLGITKASLQTRSFISAASFQETTRVLTQ
AAVEGKRDSLIGLKENVIVGRLIPAGTGAGMNRMRIAANSRDAALRAQQRALQRAMAAAN
EVEAAPAPAPVAAEPEAVDTDAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgaccaaattcaacaatcccgccgtcaagccggaaacctttgacgagatc
cagatcggcctcgcttccccggagcgtatccgttcgtggtccttcggcgagatcaagaag
cccgaaaccatcaactatcgcacgttcaagcccgagcgtgacggcctgttctgcgcgcgc
atcttcggtccggtgaaggattacgagtgcctgtgcggcaagtacaagcggatgaaatac
aagggcatcgtctgcgaaaagtgcggcgttgaagtcaccgtgaccaaggtgcgccgcgag
cgcatgggccacatcgaactggccgctcccgtcgcgcatatctggttcctcaagtcgctg
ccgtcgcgcatcggcctgctgctcgacatgcagctcaagcagctcgagcgcgtgctgtat
ttcgaaagctatgtcgtcatcgagccgggcctcaccagccttgaaaagtaccagctgctg
accgaagacgagctgctcgatgcgcaggacgagttcggtgaagacgcgttctccgcaggg
atcggcgcagaagccgtgcgccagatgctgatggacctcgacctcgaaagcgagcgtgcc
gatctgctgcaggagcttgagaccaccaagtcggagctcaagcccaagaagatcatcaag
cgcctgaaggtcgtggaatcgttcatcgattcaggcaaccgtcccgaatggatgatcctg
gaagtcatccccgtgatcccgcccgagctgcgcccgctggtgccgctggacggtggccgc
tttgcgacctcggatctcaacgatctgtatcgccgcgtgatcaaccgcaacaaccgcctg
aagcggctgatggaactgcgcgcgcctgacatcatcgtgcgcaacgaaaagcgcatgctg
caggaagccgtcgatgcgctgttcgacaacggccgtcgcggccgcatcatcaccggtgcc
aacaagcgtccgttgaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgt
cagaacctgctcggcaagcgcgtcgattattcgggtcgttcggtcatcgtgaccggtccc
gaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgagctgttcaagccg
ttcatctacgcgcgtctcgatgccaagggtctgtcgatgaccctgaagcaggcgaagaag
tgggtcgaaaaggagcgcaaggaagtctgggacatcctcgacgaagtcattcgcgagcac
ccggtcatgctcaaccgcgccccgacgctccaccgtctgggcatccaggcgttcgaaccc
gtgctgatcgagggcaaggcgatccagcttcacccgctcgtctgctcggccttcaacgcc
gacttcgatggtgaccagatggccgtccacgtcccgctgagcctcgaggcgcagctggaa
gcacgcgtgctgatgatgtcgaccaacaacatcctctcgcccgccaacggcaagccgatc
atcgttccttcgcaggacatggtgctgggtctgtactatctctcgatggaccgcgaaggc
gagcccggcgagggcatgctgatggccgacatcgccgaagtgcatcaggcgctggaaatc
ggtgcggtgaccttgcactccaaggtcattgcgcgcgttccgcagaccgacgagcagggc
aaccagtatctcaagcggtacaacaccacgcctgggcgcatgctcatcggcgagtgcctg
cccaagagccacaaggtgcccttcgacgtcgtcaaccgccttctcaccaagaaggaaatc
ggcgacgtcatcgatcaggtctatcgtcacaccggccagaaggacaccgtcctgtttgcc
gatgcgatcatgggcctgggcttccgtcacgcctgccgcgccggcatctcgttcggcaag
gacgacatgatcatccccgatagcaaggaacgtctggtcgatgagacccgcgccctggtt
gctgactatgagcagcagtatcaggatggtctgatcacccagcaggaaaagtacaacaag
gtgatcgacgcatggagccgttgcggcgaccaggtggcgaacgccatgatggaagagatc
aaggcaacgcccaaggacgagcatggccgcgaagccccggtcaactcgatctacatgatg
agccactcgggcgcgcgtggttcgccagcgcagatgaagcagcttgccggcatgcgcggc
ctgatggccaagccgtcgggcgagatcatcgaaacgccgatcatctcgaacttcaaggaa
ggtctgaccgttcttgaatacttcaactccacccacggcgcccgcaagggcctggcggat
acggcgctcaagacggcgaactcgggttacctgacccgccgtctggtcgacgtcagccag
gattgcgtcatcgtgcaggaggattgcggtaccgagaacgcgctggaaatgcgcgcgatc
gtgcagggcggcagcgtcatcgcctcgctgggcgagcgtatcctgggccgcacgctggcc
gaggatatctccgatgccaagaccggcgagatcgtgatcgccaaggacaccttgctcgac
gaagcgaatatcgcgacgatcgaggccttggggctgcaggcagcacgcatccgttcgccg
ctgatctgcgaagcgaccatgggcgtgtgcggcaagtgctatggccgtgaccttgctcgc
ggtacgccggtgaacatcggggaagctgtcggcgtcatcgccgcgcagtcgatcggtgag
ccgggcacccagctgacgatgcggaccttccacatcggcggtgcggcgcagctcaacgaa
acctcgaacctcgaagcggtggccgatggcacgctgcagtaccgggatatcccgacgatc
gtgaacaagcgcggacagcgcctgtcgctcgcccgcaacggcgaaatcgcgattgtcgac
aaggaaggccgcgaacgtgcggtccaccgcatcccgtacggcaccgtgctgctggtcgac
gacaatggtgtggtcaaccttggcgaccggatcgccgagtgggatccgttcaccatgccg
gtgatcaccgaaaagggcggcgtcgtgaagtaccaggacctgatcgacggcaagacgctg
atcgaacagaccgatgatgccaccggcatcgcacagcgcgtggtcgtggaattccgtgga
tcgctcaaagcgaagtccaaggaagatctgcgtccccgcctgaccctgctcgatgatgat
tcgggtgaagctgcccgctacatgttggcagtgggtgcgatgctttcggtcgaggaaggc
cagaaggttgaagcaggcgatgttctcgcccgtgtcagccgcgaggccgccaagacccgt
gacatcaccggtggtctgccgcgcgttgccgaactgttcgaagctcgcaagcccaaggac
aatgcgatcatcgcaaaggtctcgggccgcatcgagttcgttcgtgactacaaggccaag
cgcaagatcgcgatccatcctgaagagggtgaatcggttgagtatctggtgcccaagtcc
aaggtcatcgacgtccaggaaggcgattatgtcaagaagggcgacaacctgatctcgggt
tcgcccgacccgcatgacatccttgaagtgctcggcgtggaagcgctggccgaatatctg
gtcagcgaaatccaggaggtctatcgtctgcagggcgtgaagatcaacgacaagcacatc
gaggtgatcgtccgtcagatgctgcagaaggtggaaatcaccgacggcggcgacaccacc
ctgctgccgggcgaacagctcgatcgtgaggaaatggacgagtacaacggtcgtctcgac
gcgggcaagaagttcgcggaaggcaagcccgtgctgctcggcatcaccaaggcttcgctg
cagacgcgttcgttcatctcggcggcatcgttccaggaaaccacccgggtgctcacccag
gcggcggtcgaaggcaagcgtgactcgctgatcggcctgaaggaaaacgtcatcgtgggt
cgtctgatcccggcaggtaccggtgcgggcatgaaccgcatgcgcatcgccgccaacagc
cgcgatgcagcgctccgcgcccagcagcgtgcgctgcagcgggcgatggcagccgcgaac
gaggtcgaggcggctcccgccccggcaccggtcgcagccgagcccgaggcggtcgatacc
gacgcggaataa
DBGET
integrated database retrieval system
