Bordetella flabilis: BAU07_01380
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Entry
BAU07_01380 CDS
T04592
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAU07_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_01380
Enzymes [BR:
bfz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BAU07_01380
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAU07_01380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANN75957
UniProt:
A0A193G7K0
LinkDB
All DBs
Position
297514..301392
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AA seq
1292 aa
AA seq
DB search
MPDARPTLASMAATPLDVLRFPLHGSRLIEASAGTGKTYTIATLYVRLVLGHGGADGYDR
PLTPPQILVVTFTEAATQELRDRIRARLAQAAAYFLADPAQVAALPPGQDPLHDLRADYP
PQAWAACARKLQLAVEWMDEAAVSTIHGWCNRMLREHAFHSNSLFQQTLEQNTAPLLAEV
VRDYWRTHIAPLDAVSAAEVRAWWPGPEALQAQLQTVLKYAPQLKAPDHPEVLLCAARER
RQAMLDELKQPWPQWLPALRALFDDGVARKRVNGRQLQARYYVPWLESLAAWSEDPHAHA
PVLSDTAWQRLGPGLGEAWKGDPPDHPAFAALAELRERTRALPQARQDVLCHATAWVSRR
FAQEQAQRAQMSFDALLDQLDAALAGPSGDALAATLRGQFPVALIDEFQDTDPVQYRIFD
AVYRVARNDRATGLILIGDPKQAIYGFRGADIHTYLRARAAVQGRLYALQTNFRSTHAMV
QAVNHCFETAERRPDGQGAFLFRRADGNPVPFVSAQAHGRPDRLIVREGAQEAEVPALTA
WWLPAGEDGKPVGAGAYLETMADACAGEIVRLLTMSRDGRAAFCGAQADPPRALRPADIA
VLVDTGRQSRAIRRALSRRGVRSVYLSERQSVFASDQATQVEFWLRACAEPDDARALRAA
LATPMLGVPWHELDRLGNDELAWEARAQQFRAYARAWREKGVLPMLRRLLDDFDVPARHL
GGGRAIGVPADLHADLEDDVPGDPRPDLQAIHQSDDGGTGGERAMTDLLHIAELLQQASA
GIDGEHGLIRYLAEMRHAAEQGEENDALTIRLESDADLVRVITVHKSKGLEYPLVFLPYA
AAFRAVPADAVPLSWHDDRGDLKVALSTDADGHARADRERLGEDLRKLYVALTRARYATW
VGLAPLANLELSAFGYLIGAGESARGLPLPDALAAWQGGHPCIAVRQAPEPPSYVYRADS
GPRHDGRARAMGRAVRDHWWIASYSSLRSVRGDADPEAAPETAQEDVFQETLDAGPMPDG
DPRDAIARAVGAPRGGSAGAAALHAVPAGAQAGTFFHELLEWAAAQGFDTLPAQPERVRD
AVARRCQVRDWSAWTDPITEWLLDAVARPMALPDTPAGPVRPATLAGLDQAIPEMEFWLA
ADDVDVRRLDRIVRAYTLDDAPRPQLESTRINGMLKGFIDLVFEHEGRYYVLDYKSNRLG
PDDAAYTPAAMRDAVLAHRYDLQYALYVFALHRLLRARLPDYDYDRHVGGAVYVFLRGMR
SPHAGVFAQRPPAAMVQALDRLFAADAPREVA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgcaaggcccaccctggccagcatggcggccacgccgctggacgtgctgcgc
tttccgctgcatggcagccgcctgatcgaggccagcgccggcaccggcaagacgtacacc
atcgccaccttgtatgtgcgcctggtgctgggacacggcggcgcggacggctacgatcgg
ccgctgacgccgccgcagatcctggtggtcacttttaccgaagccgccacgcaggagctg
cgcgaccgcatacgcgcgcggctggcgcaggcggcggcatatttcctggccgatccggcc
caggtggcggccttgccgccggggcaggatccgctgcacgatctgcgcgccgactatccg
ccgcaggcgtgggccgcctgcgcacgcaagctgcagctggcggtggaatggatggacgag
gcagccgtcagcaccatccacggctggtgcaatcgcatgctgcgagagcacgccttccac
agcaacagcctgttccagcagacgctggagcagaacacggcgccgctgctggccgaggtg
gtgcgcgattactggcgcacccatatcgcgccgctcgatgccgtgtccgccgccgaggtg
cgggcctggtggcccgggccggaggccctgcaggcacagttgcagacggtgctgaaatac
gcgccgcagctcaaggcgccggatcatcccgaggtgctgctttgcgccgcccgcgagcgg
cgccaggccatgctggacgaactgaagcagccctggccgcaatggctgccggcgttgcgc
gcgctcttcgatgacggtgtcgcgcgcaagcgcgtcaacggccgccagctccaggcccgc
tactacgtgccatggctggaaagcctggcggcctggagcgaggacccgcacgcgcacgcc
cccgtcctgagcgataccgcatggcaacgcctggggccgggcctgggcgaggcctggaag
ggcgacccgcccgatcatcccgccttcgccgcgctggccgaactgcgcgaacgcacccgc
gcgctgccgcaggcacggcaggatgtgctgtgccatgccacggcgtgggtcagccggcgt
ttcgcgcaggaacaggcgcaacgcgcgcagatgagtttcgatgccttgctcgaccagctg
gatgcggcactggccggtcccagcggcgacgcgctggcggcgacgctgcgcggccagttc
ccggtcgcgttgatcgacgaattccaggacacggaccccgtgcagtaccggatcttcgac
gccgtctatcgcgtcgcgcgcaacgaccgcgccaccgggcttatcctgatcggcgatccc
aagcaggccatctacggctttcgcggcgccgatatccatacctacctgcgggcccgcgcc
gccgtgcaaggccgcctgtatgccttgcagacgaatttccggtcgacgcacgccatggtg
caggccgtcaaccactgcttcgaaacggcggagcgccgtcccgatggccaaggcgccttc
ctgttccgccgcgccgacggcaacccggtccctttcgtgtccgcgcaggcgcatggacgt
ccggaccgcctgatcgtgcgggaaggagcgcaggaagccgaggtgccggccctgacggcc
tggtggctgccggccggcgaggacggcaagccggtgggcgcgggcgcctacctggaaacg
atggccgatgcctgcgcgggcgagatcgtgcgcctgctgaccatgagccgcgatggccgt
gcggctttctgcggcgcgcaggccgacccgccgcgcgccttgcgtccggccgacatcgcc
gtgctggtcgacacggggcgccagtcgcgcgcgatacggcgcgcactgtcgcgccggggc
gtgcgcagcgtctacctgtccgaacggcaatccgtgttcgccagcgaccaggccacgcag
gtcgagttctggctgcgcgcctgcgccgagcccgacgatgcgcgcgcattgcgcgccgcc
ctcgccacgccgatgctgggcgtgccctggcatgaactggaccgcctgggcaatgacgag
ctggcgtgggaagctcgtgcacagcagttccgcgcctatgcgcgcgcctggcgcgagaag
ggcgtgctgcccatgctgcgccgcctgctcgacgacttcgacgtgcccgcgcgccacttg
ggcgggggccgcgcgatcggtgtgccggccgacctgcacgccgaccttgaagacgatgtt
ccaggcgatccccgacccgacctgcaagccatccaccagtccgacgacggcggcaccggc
ggcgagcgcgcgatgacggaccttctgcacatcgccgaactgctccagcaggccagcgcg
ggcatcgatggcgaacacggcctgatccgctatctggcggaaatgcgccacgccgccgaa
cagggcgaagagaacgatgccctgaccatccgcctggaaagcgatgccgacctggtgcgg
gtgatcaccgtgcacaaatccaaggggctggagtatccgctggtcttcctgccctacgcc
gcggcgtttcgcgcggtgccggccgacgccgtgcccttgtcctggcatgatgaccggggc
gacctgaaggttgcgctatccacggatgccgacggccacgcgcgcgccgatcgcgagcgc
ctgggcgaggacctgcgcaagctgtacgtggcgctgacacgtgcgcgctacgccacgtgg
gtgggcctggccccgctggcgaatctggagctcagcgcgttcggctatctgatcggcgcc
ggagagtccgcgcgcggactgcctttgccggacgcccttgcggcctggcagggcgggcat
ccctgcatcgcggtgcggcaggcgccggagccgccgtcctatgtctatcgcgccgacagc
gggccccggcatgatggccgtgcgcgcgccatgggacgcgccgtgcgcgaccactggtgg
atcgccagttattcgtcgctgcgttctgtccggggcgatgccgatcccgaggccgcgccg
gaaaccgcacaggaagacgttttccaggaaacgctcgatgccggccccatgccggatggc
gatccgcgcgacgcgatcgcgcgcgccgtcggggcgccgcgtggcggatccgcgggcgcc
gcggcgctgcacgccgttcccgctggggcgcaggccggcaccttctttcacgaactgctg
gagtgggccgccgcccagggcttcgatacgctgcccgcgcagccggagcgcgtgcgcgat
gcggtggcgcggcgctgccaggtacgcgactggtcggcatggacggacccgatcaccgag
tggctgctcgatgccgttgcgcgtcccatggccttgcccgatacgccggccggtcccgtg
aggccggccaccctggcgggactggaccaggccatcccggagatggagttctggctggcc
gccgacgacgtggacgtacgccgcctggatcgcatcgttcgcgcgtacacgctggacgac
gcgccgcggccgcagctcgaatccacgcgcatcaacggcatgctgaagggcttcatcgac
ctggtcttcgagcacgaaggacggtattacgtgctggactacaagtccaaccgcctgggt
ccggacgacgcggcctacacgccggccgcgatgcgcgacgccgtcctggcgcaccgctat
gacctgcaatacgcgctgtatgtgttcgccctgcaccggctgctgcgcgcccgcctgccg
gactacgattacgaccggcacgtgggcggcgcggtctatgttttcctgcgcggcatgcgg
tcgccgcacgccggcgtgttcgcgcagcggcccccggccgccatggtgcaggcgctggac
cggctgttcgccgccgatgcgccgcgggaggtggcctga
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