Burkholderia sp. CCGE1003: BC1003_3249
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Entry
BC1003_3249 CDS
T01314
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BC1003_3249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgf03021
]
BC1003_3249
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_3249
Enzymes [BR:
bgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BC1003_3249
Transcription machinery [BR:
bgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BC1003_3249
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BC1003_3249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
UbiD
Nif11
Motif
Other DBs
NCBI-ProteinID:
ADN59196
UniProt:
E1TBG2
LinkDB
All DBs
Position
1:complement(3759682..3763788)
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADTPSTQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYMLSPPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMPE
GAQMEFVPERLRGEVARFDITDRDGNVIVQKDKRINAKHIRDLDNAKTKFISVPEDYLLG
RVLAKNVVDGDTGEVIANANDEITETVLEKLREAKIKDIQTLYTNDLDQGPYISSTLRID
ETADKMAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEI
VGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDGKVTDQIDYLSAIEEGRYVIAQANAAVAEDGTLTDELVSSREAGETLMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKAVVGTGIERTVAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDEEAVAGDVGVDIYNLIKYTRSNQNTNINQRPIVKVG
DKVSRGDVLADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLTGKVANGGPKKLAKGTKIEQAYLEDLDHYHWFDIR
LADEEAAAQLEAIKDSIEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEELREFLTKIYNESGRAEELDSFTDDEIVELAKNLREGVPFAT
PVFDGATEEEMSRALDLAFPDDIAQNLGMTPSKNQVRLYDGRTGEMFERTVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgtattcgcaagagttttgcgaagcgccccatc
gttcaccaagtacctttcctgctggctacccagcttgaatcattcagcacgtttctgcaa
gcagatacgccgtctacgcagcgcaagccggaaggcctgcaggccgcgttcacatccgtt
ttcccgattgtttcgcacaacgggttcgcacgtctcgagttcgtcagctacatgctgtcg
ccgccggcgttcaacatcaaggaatgtcagcagcgcggtctgacgtactgctcggcgctg
cgcgccaaagtgcggctggtgctgctcgataaagaatcgccgagcaagccggtcgtcaag
gaagtgaaggaacaggaagtgtacatgggcgaaatcccgctcatgacgccgaccggttcg
ttcgtcatcaacggcacggaacgtgtgatcgtttcgcagctgcaccgttcgcctggcgtg
ttcttcgagcacgacaagggcaagacgcacagctcgggcaagctcctgttctccgcacgt
atcatcccttaccgcggttcgtggctcgacttcgaattcgacccgaaggacgtgttgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggccatcggtctc
acgccggaacagatcctcgcaaacttcttcgtgttcgacaacttcacgctgatgccggaa
ggcgcgcagatggagttcgtaccggagcgtctgcgcggcgaagtcgcgcgtttcgacatt
acggaccgcgacggcaacgtgattgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgatctggacaacgccaagacgaagtttatttcggttccggaagactatctgctcggt
cgcgtgctggcgaagaatgtcgtggacggggacaccggcgaagtcatcgcgaacgcgaac
gacgaaatcaccgagaccgttctcgagaagctgcgcgaagcgaagatcaaagacatccag
acgctctacacgaacgatctggatcaaggtccgtacatttcgtccacgctgcgtatcgac
gaaaccgccgacaagatggccgcgcgcatcgcgatttatcgcatgatgcgtccgggtgaa
ccgccgaccgaagaagcggtcgaggcgctgttcaaccgtctgttctacagcgaagacgca
tacgacctctcgaaggtgggtcgtatgaagttcaaccgtcgcgtgggtcgcgacgagatc
gtcggcccgatgacgctgcaggatgacgacatcctcgccacgatcaagattctggtcgag
ctgcgtaacggcaagggcgaagtcgacgacatcgaccacttgggcaaccgccgcgtgcgt
tgcgtcggcgaactggcggagaaccagttccgcgcgggcctcgtgcgtgtcgagcgggct
gtgaaggaacgcctcggccaggccgaaagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgattcgcgagttcttcggttcgtcgcagttgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacccacaagcgccgtgtttcggcactgggc
ccgggcggtttgacgcgtgagcgcgcaggcttcgaagtgcgcgacgtgcacccgactcac
tacggtcgcgtctgtccgatcgaaacgcctgaaggtccgaacatcggcctgatcaactcg
ctcgctctgtacgcgcacctgaacgaatacggcttcctcgaaacgccgtaccgcaaggtc
gtggacggcaaggtgaccgaccagatcgactacctgtcggcgattgaagaaggccgttac
gtgatcgctcaggcgaacgcggctgttgctgaagacggcacgttgaccgacgaactggtg
tcgtcgcgtgaagccggcgaaacgctgatggtaacgcccgaccgcatccagtacatggac
gtggcgccgtcgcagatcgtttcggtggctgcatcgttgattccgttcctcgagcacgac
gacgcgaaccgcgcgttgatgggctcgaacatgcagcgtcaggctgtgccgtgtctgcgt
ccggaaaaggccgtggtcggtacgggtatcgagcgcacggtggcggtcgactcgggcacg
acggttcaggcattccgcggcggtgtggtcgactacgtcgacgcaggccgtatcgtgatt
cgcgtgaacgacgaagaagcggtggcgggcgatgtcggtgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtaaaggtcggc
gacaaggtttcgcgtggcgacgtgctggctgacggcgcatcgacggacctcggcgaactg
gctctcggccagaacatgctggtcgcgttcatgccgtggaacggctacaacttcgaagac
tcgatcctgatctcggagaaggtggtggccgacgaccgttacacgtcgatccacatcgaa
gaactgaacgtcgtagcgcgcgacacgaagctcggaccggaagaaatcacgcgcgacatc
tcgaacctggctgaagtgcaactcggccgtctcgacgagtcgggcatcgtctacatcggc
gctgaagtcgaagcaggcgacgtgctggtcggcaaggtcacgccgaagggcgaaacccag
ctgacgccggaagaaaagctgctgcgcgcgatcttcggcgagaaggcttcggacgtgaag
gacacttcgctgcgcgtgccgtcgggcatgagcggcacggtgatcgacgttcaggtgttc
acgcgtgaaggcattcagcgtgacaagcgcgcgcaacagatcatcgacgatgaactgaag
cgctatcgcctcgacctgaacgaccagctgcgtatcgtggaaggcgacgcgttccagcgt
ctcgcacgtatgctgaccggcaaggtcgcgaacggtggtccgaagaagctggcgaagggc
acgaagatcgaacaggcttacctggaagatctcgaccactatcactggttcgacatccgc
cttgcggacgaagaagcagcggctcagctcgaagcgatcaaggactccatcgaacagaag
cgtcaccagttcgatctcgcgttcgaagaaaagcgcaagaagctcacgcagggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtatctcgcagtcaagcgccgtctgcag
ccgggcgacaagatggcaggccgtcacggcaacaagggtgtcgtgtcgaagatcgtaccg
atcgaagacatgccgtacatggccgacggccgtccggctgacgtcgttctcaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggtgctcgaagtgcatctgggttgggccgcg
aagggtctcggctggcgtatcggcgaaatgctgcagcgtcaggcgaagatcgaagaactg
cgcgaattcctgaccaagatttacaacgagtcgggccgcgctgaagagctggacagcttc
actgacgacgagatcgtcgaactggcgaagaacctgcgcgaaggcgtgccgttcgcaacg
ccggtgttcgacggcgcgacggaagaagaaatgtcgcgcgcgctggatctggcgttcccg
gacgacatcgcgcaaaacctcggcatgacgccgtcgaagaaccaggttcgcctgtacgac
ggccgcacgggcgagatgttcgaacgtacggtgacggtcggctacatgcactacctgaag
ctgcaccacctggtcgacgacaagatgcacgcgcgttctacgggcccatactcgctcgtg
acgcagcagccgttgggcggtaaggcgcagttcggtggccagcgtttcggtgagatggaa
gtgtgggcgctcgaagcgtacggtgcatcgtacgtgctgcaagaaatgctgacggtgaag
tcggacgacgtgacaggccggaccaaggtgtacgagaacctggtcaagggcgatcacgtg
atcgatgcaggcatgccggagtccttcaacgtgttggtgaaggaaatccgctcgctcggt
atcgatatcgacctcgaccgcaactaa
DBGET
integrated database retrieval system
