Burkholderia sp. CCGE1003: BC1003_3782
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Entry
BC1003_3782 CDS
T01314
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf02020
Two-component system
bgf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BC1003_3782
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BC1003_3782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgf03021
]
BC1003_3782
Transcription machinery [BR:
bgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BC1003_3782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ADN59722
UniProt:
E1TJA2
LinkDB
All DBs
Position
2:complement(296878..298359)
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AA seq
493 aa
AA seq
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MPSIELRTRQSLALTPRLQQSVRLLQLSSLEFQQELRTALDTNPFLEYDSSDTEDVALAT
PTPGDESGALPATDAVAAAEPDALPAEAVTSETLDSGGPDDMPGDFSGDYSSRSSARQNG
DSDGSDPAEWARSQPTLREQLHDALRLYRLDDRDRAVARFIIEALDDDGYLRQNLADLAD
SVDLEPELTEEELLVALRLVQSLDRPGLGARSLSECLLLQLNALPAETPGREVARQIVEH
HLERLARREQAELQKQIGCSAEELRVACALVRKLDPKPGNCYGRTEDNYIVPDVIVRQVR
NKWVVTINPAVQPRARIHRMYAELFAQSAGASRSPLAQQLQEARWLIRNAQQRFDTIQRV
AECIVAHQKAFFQYGEIALKPMVLRDVADELGLHESTISRATGNKYMATPRGIFEFKHFF
PRELGTESGGTCSAAAVRALLKEMIAAENARDPLSDVTLAKMLADQGVLVARRTVAKYRH
LMKVPPAELRRQV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaattgaacttcgcacaaggcagtctcttgcactcacgccgcggttgcagcag
tccgtgcgtctgttgcagctatcgtctctggagttccagcaggaattgcgaaccgcgctc
gacaccaatccgttcctcgaatatgactcgtcggatacggaagacgttgcgctcgcaacc
ccgacccccggcgacgaatccggcgcgctgcccgccaccgatgccgtcgcggcagccgag
cccgatgcgctgcccgcagaagcagtcacgagcgaaacactcgacagcggcggcccggac
gatatgcccggcgatttctccggcgactacagcagccgtagctccgcccgtcagaacggc
gattcggacggcagcgatcccgcggaatgggcacgttcgcagccgaccttgcgcgagcag
ttgcacgacgcactgcgcctctacaggctggacgaccgcgatcgcgccgtggcgcgcttc
atcatcgaggcgctcgacgacgacggttatctacgccagaacctcgcggatctcgccgac
agcgtcgatctcgagcccgagttgacggaagaagagctgctggtcgcgctgcgcctcgtg
cagtcgctcgatcgacccggcctcggcgcgcgttcgctgtccgaatgcctgctgctgcaa
ctgaacgcgttgcctgccgaaacgccggggcgcgaggtcgcgcgccagatcgtcgagcat
catctcgagcgactcgcgcgccgcgagcaggcggaattgcagaagcagattggctgcagc
gccgaggaactgcgtgtggcctgcgcgctcgtgcgcaagctcgacccgaagccgggcaac
tgctatggccgcaccgaggacaactacatcgtaccggacgtgatcgtgcgccaggtccgc
aacaagtgggtcgtgacgatcaacccggccgtgcagccgcgcgcccgcattcaccgcatg
tatgcggagctctttgcgcagtccgctggggcgagccgttcgccgcttgcccagcagctt
caggaagcccgctggttgatcaggaatgcacagcaacgcttcgatacgattcagcgtgtg
gccgaatgcatcgtcgcgcatcagaaggccttcttccagtacggcgaaatcgcgttgaag
ccgatggtgttgcgcgatgtcgccgacgaactcggcctgcatgaatcgaccatctcgcgc
gcaaccggcaacaaatatatggccacaccgcgcggcattttcgaattcaagcacttcttc
ccgcgcgaactcggcacggaaagcggcggcacctgttccgcggccgcggtgcgggcgctg
ctgaaggaaatgatcgcggcggaaaacgcccgcgatccgctctccgacgtaacgctggcg
aagatgctggcggaccagggcgtgctggtcgcgcgccgtacggtcgccaagtatcgtcat
ctgatgaaggtgccgccggcggagttgcgccgccaggtctga
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