Alkalicoccobacillus gibsonii: BGM20_07310
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Entry
BGM20_07310 CDS
T04820
Name
(GenBank) RNA polymerase sigma factor SigZ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgi03021
]
BGM20_07310
Transcription machinery [BR:
bgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BGM20_07310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
DUF134
HTH_3
HTH_AsnC-type
MarR_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AOL30446
LinkDB
All DBs
Position
complement(1399159..1399689)
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AA seq
176 aa
AA seq
DB search
MNIEDLWDQFHQPLKTYISQRVNDQSIVDDLLQIVFMKIQVHLPNLIDEQKIDSWIYRIT
RNTIIDFYRTKKTSEILPDDLHFNNRAEEENFTKEATVCIRSTIKRLPEKYREALELTEF
QGLSQKELSEKLGISYSGAKSRVQRGRGKLKQLLEGCCNIEADRYGNIVDFRILKE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagaggatctatgggatcaatttcatcagccgttaaaaacatatatttcacaa
agggttaacgatcaatctatcgttgatgacctcttgcaaatcgtatttatgaaaatacaa
gtgcatctcccaaatctgatcgatgaacaaaagatcgacagctggatttatcggatcact
agaaatacgattattgatttttaccgtacaaaaaaaacaagcgaaatattgcctgatgat
ctacattttaataaccgtgcagaggaagaaaatttcaccaaggaagcaactgtgtgtatt
cgatcgaccatcaaacggttgcctgaaaagtatcgagaggcgctcgagttaactgaattt
caggggttatcacagaaagagttgagtgaaaagctcggcatttcttactcaggagcaaaa
tcaagggtacaacgcggacggggaaaattaaaacagctgcttgaggggtgctgtaatatt
gaagcggatcgatatggaaatatcgtagactttcgtattttaaaggaataa
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