Bordetella genomosp. 13: CAL15_14015
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Entry
CAL15_14015 CDS
T05441
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgm03009
]
CAL15_14015
Enzymes [BR:
bgm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CAL15_14015
Ribosome biogenesis [BR:
bgm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CAL15_14015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
RrnaAD
Methyltransf_31
MTS
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_32
Methyltransf_11
Met_10
Motif
Other DBs
NCBI-ProteinID:
ARP95403
UniProt:
A0A1W6ZDE4
LinkDB
All DBs
Position
complement(3134136..3135545)
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AA seq
469 aa
AA seq
DB search
MSDVLKIESLDLEARGIARRDGKVVFVEGALPGERVATATVRRKPSYEIARVESVLTPSS
QRVVPRCPHFGVCGGCAMQHLEPSAQVAIKQRALEDTFWHIGKLRPSRMLPPLHGPTWGY
RYRARLSVRVVPKKGGVLVGFHERKSSYVADMRECHVLPASVSALLMPLRALIASMSAPD
RMPQIEVALGDAVTVLVLRHLLPLTDGDVSLLRAFADKHGVQWWLQSKGPDTVQPLEPAH
ADALAYSMPEFGLRMPYRPTDFTQVNHAINRALVSRALTLLDPRPTDRVADLFCGLGNFT
LPLATRAREAVGVEGSKTLTDRAMQAARQHGLQDSTSFATLNLFEVDVEWLRGLGHFDRM
LIDPPREGAQAVAQALSQLSHAERPVRIVYVSCNPATLARDAAIMVHEGGYALRAAGAIN
MFPHTGHVESIAVFESLDEQAVVAAQTQAAQKRLAEGADQSPDGMDAAA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtattgaaaatcgagtccctggacctggaagcccggggcatcgcccgccgc
gacggcaaggtcgtgttcgtcgagggcgccctgcctggcgaacgcgtggccacggccacc
gtgcgccgcaagccgtcctacgagatcgcgcgcgtcgagtccgtcctgacgccgtcctcg
cagcgcgtcgtgccgcgctgcccgcacttcggcgtgtgcggcggctgcgccatgcagcat
ctcgagccctccgcgcaggtcgccatcaagcagcgcgcgctcgaggacaccttctggcac
atcggcaagctgcgtccgtcgcgcatgctgcctccgctgcacgggcccacgtggggctat
cgctatcgcgcccgcctgtcggtgcgggtggtgcccaagaagggcggcgtgctggtcggc
tttcacgaacgcaagagcagctatgtggccgacatgcgcgaatgccacgtcctgccggcg
tcggtcagcgcgctgctcatgccgctgcgcgcgctgatcgccagcatgtcggcgcccgac
cgcatgccgcagatcgaggtggcgctgggcgatgccgtgaccgtgctggtgctgcgtcat
ctgctgccgcttaccgacggcgacgtgtccttgctgcgcgccttcgccgacaagcacggc
gtgcaatggtggctgcagtccaaggggcccgatacggtgcagccgctcgaacccgcgcac
gccgacgcgctcgcctattccatgcccgagttcggcttgcgcatgccgtaccggcccacc
gatttcacgcaagtcaaccatgccatcaaccgcgcgctggtgtctcgcgcgctgacgctg
ctggatccgcggcccaccgaccgcgtcgccgacctgttctgcggcctgggcaatttcacg
ctgccgctggccacgcgtgcgcgcgaggccgtgggcgtggaaggcagcaagacgctgacc
gaccgcgccatgcaggcggcgcgccagcacggcctgcaggacagcaccagcttcgccacg
ctgaacctgttcgaggtcgacgtggagtggctgcgcggcctgggccacttcgaccgcatg
ctgatcgacccgccgcgcgagggggcgcaggcggtggcgcaggcgctgtcgcaactgagc
catgccgagcggcccgtgcgcatcgtgtacgtctcctgtaatccggccacgctggcgcgg
gacgcggccatcatggtgcacgagggcggctatgcgctgcgcgcggcgggcgcgatcaac
atgttcccgcataccggccacgtcgagtccatcgcggtattcgaatccctggacgagcag
gccgtcgtggcggcgcagacccaggcggcgcagaagcggctggcggagggggcggatcaa
tcgcccgacggcatggacgcggctgcctga
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