Bordetella genomosp. 8: CAL12_07235
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Entry
CAL12_07235 CDS
T09515
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CAL12_07235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgv03400
]
CAL12_07235
DNA repair and recombination proteins [BR:
bgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CAL12_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ARP80651
UniProt:
A0A1W6YHY2
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All DBs
Position
complement(1576126..1577058)
Genome browser
AA seq
310 aa
AA seq
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MASSRTIWKGAISFGLVNIPVGLHTAAVESGVDFDWLDKRSMDPVGYKRINKRTGREIDR
DNIVKGVEYEDGKYVIISPEEIAEAYPRTTQTIEIQRFVPADQLSFVYLERPYYIAPINK
GHKVYALLRDTLAKTGKIGIAKVVIQTKQHLAALVPSGDAMILNLMRWGDEIKSMEDLDL
PTVGAKAMAASPQEQKMAKMLVDDMSGDWNPDDFQDEFRHAIMALVEQKVQAGKTETVIE
PQEEAPSVGGDNVIDLTELLQRSLKGRSAPKADAPAKTPARKAAKKTAAKSASKTAKSAS
KSGGRTRKAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcaagaacgatctggaaaggcgccatttcattcgggctggtgaacatcccg
gtgggcctgcataccgccgccgtcgagtcgggcgtcgacttcgactggctggacaagcgc
agcatggacccggtgggctacaagcgcatcaacaagcgcaccggccgcgaaatcgaccgc
gacaacatcgtcaagggcgtcgaatacgaagacggcaagtacgtcatcatttcgccggaa
gagatcgccgaagcctacccgcgcaccacgcagaccatcgaaatccagcgcttcgtgccg
gcggaccagctttccttcgtctacctggagcggccctactacatcgcccccatcaacaag
gggcacaaggtctacgcgctgctgcgcgacacattggccaagaccggcaagatcggtatc
gccaaggtggtgatccagaccaagcagcacctggcagcgctggtgccgtcgggcgatgcg
atgatcctgaacctcatgcgctggggcgacgagatcaagtccatggaagatctcgacctg
cccaccgtcggcgccaaggcgatggccgccagcccgcaggaacagaagatggccaagatg
ctggtcgacgacatgtccggcgattggaatccggacgacttccaggacgagttccgccac
gccatcatggccttggtcgaacagaaggtgcaggccggcaagaccgaaaccgtgatcgag
ccgcaggaagaagcgcccagtgtcggcggcgataacgtgatcgacctgaccgaactgctg
caacgcagcctgaaaggccggtccgcgcccaaggccgacgcgccggccaagacgcccgcc
aggaaggcagcgaagaagaccgccgccaagagcgcatcgaagacggccaagtcggcatcg
aaatccggcggacgtacgcgcaaggcggcctga
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