KEGG   Bordetella genomosp. 8: CAL12_07235
Entry
CAL12_07235       CDS       T09515                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
bgv  Bordetella genomosp. 8
Pathway
bgv03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bgv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CAL12_07235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgv03400]
    CAL12_07235
DNA repair and recombination proteins [BR:bgv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CAL12_07235
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ARP80651
UniProt: A0A1W6YHY2
LinkDB
Position
complement(1576126..1577058)
AA seq 310 aa
MASSRTIWKGAISFGLVNIPVGLHTAAVESGVDFDWLDKRSMDPVGYKRINKRTGREIDR
DNIVKGVEYEDGKYVIISPEEIAEAYPRTTQTIEIQRFVPADQLSFVYLERPYYIAPINK
GHKVYALLRDTLAKTGKIGIAKVVIQTKQHLAALVPSGDAMILNLMRWGDEIKSMEDLDL
PTVGAKAMAASPQEQKMAKMLVDDMSGDWNPDDFQDEFRHAIMALVEQKVQAGKTETVIE
PQEEAPSVGGDNVIDLTELLQRSLKGRSAPKADAPAKTPARKAAKKTAAKSASKTAKSAS
KSGGRTRKAA
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcctcgtcaagaacgatctggaaaggcgccatttcattcgggctggtgaacatcccg
gtgggcctgcataccgccgccgtcgagtcgggcgtcgacttcgactggctggacaagcgc
agcatggacccggtgggctacaagcgcatcaacaagcgcaccggccgcgaaatcgaccgc
gacaacatcgtcaagggcgtcgaatacgaagacggcaagtacgtcatcatttcgccggaa
gagatcgccgaagcctacccgcgcaccacgcagaccatcgaaatccagcgcttcgtgccg
gcggaccagctttccttcgtctacctggagcggccctactacatcgcccccatcaacaag
gggcacaaggtctacgcgctgctgcgcgacacattggccaagaccggcaagatcggtatc
gccaaggtggtgatccagaccaagcagcacctggcagcgctggtgccgtcgggcgatgcg
atgatcctgaacctcatgcgctggggcgacgagatcaagtccatggaagatctcgacctg
cccaccgtcggcgccaaggcgatggccgccagcccgcaggaacagaagatggccaagatg
ctggtcgacgacatgtccggcgattggaatccggacgacttccaggacgagttccgccac
gccatcatggccttggtcgaacagaaggtgcaggccggcaagaccgaaaccgtgatcgag
ccgcaggaagaagcgcccagtgtcggcggcgataacgtgatcgacctgaccgaactgctg
caacgcagcctgaaaggccggtccgcgcccaaggccgacgcgccggccaagacgcccgcc
aggaaggcagcgaagaagaccgccgccaagagcgcatcgaagacggccaagtcggcatcg
aaatccggcggacgtacgcgcaaggcggcctga

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