Halalkalibacterium halodurans: BH3594
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Entry
BH3594 CDS
T00039
Symbol
uvrA
Name
(GenBank) excinuclease ABC (subunit A)
KO
K03701
excinuclease ABC subunit A
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BH3594 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH3594 (uvrA)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BH3594 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BH3594 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_29
AAA_21
AAA_22
nSTAND1
AAA_23
nSTAND3
AAA_18
APS_kinase
DnaJ_CXXCXGXG
AAA_33
NACHT
MMR_HSR1
AAA_25
ATPase_2
Viral_helicase1
NB-ARC
PRK
cobW
Septin
RACo_linker
MeaB
DUF463
NTPase_1
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
BAB07313
UniProt:
Q9K6Y0
LinkDB
All DBs
Position
complement(3694032..3696905)
Genome browser
AA seq
957 aa
AA seq
DB search
MGLDNIVVKGARSHNLKNIDVTIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIFDYLRLLYARIGKP
VCPKHGIEISSQTVQQMVDRILSYEERTKLQILAPLVSGRKGTHVKVLEDIKKQGFVRVR
IDGEMREVAEEIELDKNKKHTIEVVIDRIVVKEGIETRLADSLETALQLADGRVVVDIIG
KEELLFSQHHACPQCGFSIPELEPRMFSFNSPFGACPTCDGLGVKLEVDLELVIPDRSRT
LSENAIAPWEPISSQYYPQMLEAVCNHYGIDMDTPVEQLPDHQLEKILYGSGHEKIFFRY
ENDLGQVRENEILFEGVIPNVKRRYHETSSDYIRDQLEAYMAQKACPTCKGHRLKKEALA
VLIGGKHLGEVTKLSIKEAKTFFESLELSKKDFSIARLILKEINDRLGFLMNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISTLAHMRDLGNT
LIVVEHDEDTMLAADYIIDIGPGAGVHGGQVTAAGSPEEIMNDAKSLTGQYLSGKKFIPI
PSERRQPNGRSFTVKGASENNLKQVNVEFPLGVFIAVTGVSGSGKSTLINEIVHKALAQK
LHRAKDKPGKHKEIVGIEHVDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAMTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLDITYKG
KTIADVLDMTVEEALEFFTNIPRIKRKIQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAS
QLHKRATGKTLYILDEPTTGLHVDDIDRLLKVLQRIVDNGDTVLVIEHNLDVIKTVDHII
DLGPEGGDKGGTIVAQGTPEEVVEVEGSYTGKYLRPILERDRKRMDSRIREHELQRS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggggttagataacattgttgtaaaaggagcacgctcccacaacttaaaaaacatagac
gtaaccattcctcgagataagctcgtcgtgttaaccgggctttcgggctctgggaagtca
tctttggcttttgatacgatttatgctgaaggacagcggcgatatgtagagtccctttct
gcttatgcacgtcagttcctcggacaaatggataagcctgatgtggactcgattgaaggc
ttgtcgccggccatttcaatcgatcaaaaaacgacaagtcgaaatccccgttcaactgta
ggaacggtgacagagatttttgattatttgcgccttctctatgcgcgtatcggaaaacct
gtctgtccgaagcatggaattgaaatttcctcgcaaacagtacagcaaatggtggatcgg
atactttcttatgaagaacggacaaagctgcaaattctcgcccctcttgtatctggacga
aaagggacacacgtgaaagtactagaggatattaaaaagcaagggtttgttcgggtgcgc
atagatggggaaatgcgtgaggtagcggaagaaatagagctagacaaaaacaagaagcat
acgattgaagtcgtgattgaccgaattgtcgtaaaagaaggcattgaaactcgtttagcg
gattctcttgaaacagcgttgcaattggccgatgggcgagttgttgtcgatattattggc
aaagaggaattgctgtttagccagcaccatgcgtgcccccaatgtggcttctctattcct
gagcttgagccgcgaatgttctcttttaacagcccttttggcgcttgtccgacgtgtgat
gggctaggggtaaagctagaggttgatcttgaacttgtaattcctgatcgatctcgaacg
ttaagtgagaacgccattgcaccgtgggagccgattagctcgcaatactatccgcaaatg
ctggaagcggtttgcaaccattacggaattgatatggatacaccagtggaacagctaccc
gaccatcagcttgagaaaattttgtatggcagtggccatgaaaaaatctttttccggtat
gaaaatgacctagggcaagtgcgggaaaatgagatcctttttgaaggggtcatcccgaat
gtgaaacgtcgttatcacgaaacgtcatcggattacattcgcgatcaacttgaagcgtat
atggcgcaaaaggcttgtccaacgtgtaaaggtcatcgcttgaaaaaagaagcgttagct
gttttaattggcggtaaacatttaggagaagtgacgaagctatcgataaaagaagctaaa
acattttttgagtcgttagagctgtccaaaaaagatttttcgattgcgaggttaatctta
aaagaaataaatgaccgccttggctttcttatgaatgtcggtctggattatttaacgtta
agccgctctgctggcactttatctggaggagaagcccagcgcattcgcctcgcgacacaa
atcggatcttcgctcatgggcgttctctacatcttagacgagccgtccattggccttcat
cagcgggataacgaccgactcatttcgactcttgctcatatgcgtgacttagggaacacg
ttgattgtcgtggaacatgacgaagatacgatgctagcggctgactatattatcgatatt
ggaccaggagctggtgttcatggcggtcaagtcacagctgcaggtagtcctgaggaaatt
atgaatgatgccaagtcgcttaccgggcagtatttgtcggggaaaaagtttatcccgatt
ccaagtgagcgtcgccagccgaacggaaggtcatttaccgttaagggagcgagtgagaac
aacttaaaacaagtgaatgtggaattccccctcggtgtgtttattgctgtaactggggtg
tcaggatcggggaaaagtacgcttattaacgaaatcgtccataaagcccttgcgcaaaag
ttacacagagcgaaagacaagccaggaaaacataaagagatcgtcggtattgagcatgtg
gacaaagtaattgatattgatcaatcgccgatcggtcggacgccacgctccaatccagca
acgtacacaggggtgtttgacgacatccgcgatgtgtttgcgatgacaaatgaagcgaag
gtacgtggctataaaaaagggcgcttctcctttaacgttaaaggtggtcggtgtgaggct
tgtcgcggtgatggcatcatcaagatcgagatgcactttttaccagacgtctatgttcct
tgtgaagtgtgtcatggaaaacgttacaaccgggaaacgcttgacattacgtataaagga
aaaacgattgccgatgttttagacatgacggtggaggaagcattagaatttttcacgaac
atcccgcggatcaagcgaaaaattcaaacgttagtcgatgtcggtttagggtatattaag
cttggtcaacctgccaccaccctttctggaggtgaggcgcagcgcgtgaagcttgcttct
cagcttcataagcgagcaacagggaaaactctctacattttagatgaaccgacgacaggg
ctccatgtggatgatattgaccggctccttaaagtattgcaacgaattgtagataatggt
gacaccgtgcttgtcatcgaacataatctagatgtgattaaaacggttgatcatattatt
gatcttggtccggaaggtggcgacaaagggggaacgattgttgctcaaggaacccctgaa
gaagtagttgaagtagaagggtcctatacaggtaagtatttgcgtccgattttagagcga
gatcgtaagcggatggactctcgtattcgcgagcatgaattgcagcgtagttga
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