Bacillus halotolerans: DIC78_01095
Help
Entry
DIC78_01095 CDS
T06619
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bht
Bacillus halotolerans
Pathway
bht03030
DNA replication
bht03430
Mismatch repair
bht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DIC78_01095 (polC)
03430 Mismatch repair
DIC78_01095 (polC)
03440 Homologous recombination
DIC78_01095 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bht03032
]
DIC78_01095 (polC)
03400 DNA repair and recombination proteins [BR:
bht03400
]
DIC78_01095 (polC)
Enzymes [BR:
bht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DIC78_01095 (polC)
DNA replication proteins [BR:
bht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DIC78_01095 (polC)
DNA repair and recombination proteins [BR:
bht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DIC78_01095 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AZV47720
LinkDB
All DBs
Position
complement(254694..259007)
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQINMTDDTFMTYFEDGEIKKLTIHKVSKSWHFHFKFKSLLPYQI
YDMLTMRLTQSFAHIAKVTSSIEVHDAEVDEGLVQDYWTRCIEELQGISPPIISLLSQQK
PKLKGNKLIVKTKTDTEASALKNKYSAMIQAGYRQFGFPDFQLDAEIFVSDQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKNREDTAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAQKHGIKMIYGMEANIVDDGVPIAYNPAHRLLDEET
YVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFESFANPHRPLSATIIELTGITDDML
VDAPDVIDVIRDFREWIGDDILVAHNASFDMGFLNVAFKKLLQVEKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFNIELTQHHRAIYDTEATAYLLLKMLEDAAEKGIQYHDQLNENM
GQSNAYQRSRPYHATVLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDVASFYDYLEVQPPEVYRHLLELELVRDEKSLKEIITNI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILVSSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVTNTQKVASLIEDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
QLPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYICAECQHSEFFNDGSVGSGFDLPDKMCPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDNNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTQEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIKAVMED
INSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaagatggcgagattaaaaagctgacgatacac
aaagtatctaaatcttggcattttcattttaaatttaaatctttgctgccttatcaaata
tatgacatgttaaccatgaggctgacgcaatcgtttgcccatattgcaaaagtgacgtct
tcaatcgaagtgcatgatgccgaggttgatgaaggcctcgtgcaggattactggacacgc
tgcattgaagagctgcaaggcatttcaccgccgattatcagtctcttaagccagcaaaaa
ccaaagctgaagggcaacaaactgattgtcaaaacaaaaacggatacagaagcatctgct
cttaagaacaaatacagtgcgatgattcaagcgggataccgtcaatttgggtttccagat
tttcagcttgatgctgaaatatttgtatctgatcaagaagtgcaaaagtttcgggaacaa
aagctagctgaagatcaagaacgggcgatgcaggctttaattgaaatggagaagaaagat
aaagaaagtgatgaagatcaagctccttcagggcctcttgttatcggctatcaaattaaa
gataacgaggaaatcagaacacttgacagcataatggacgaggaacggagaattacggtt
cagggctatgtgtttgatgtggaaaccagagaactgaaaagcgggcgcacgctgtgcatc
ttcaaaattactgactacacaaatagtatcttaattaaaatgtttgcaagagaaaaagaa
gatgcggccttgatgaagtctctgaaaaagggcatgtgggtaaaagcgcgcggaagcatt
caaaacgacacctttgtccgagatctggtcatgattgcaaacgatgtaaatgagataaaa
gcaaaaaaccgtgaagacacggcgcctgaaggagaaaaaagggtagaattgcatctgcat
tccccaatgagccaaatggatgctgtaacaggcatcggaaagcttgttgaacaggcgaaa
aaatgggggcatgaggcgatcgctttgactgaccatgctgtcgttcaatccttcccagat
gcgtattctgctgcccaaaaacatggaattaaaatgatttacggaatggaagcaaatatc
gtggatgacggggtgccgattgcttataatcccgcacaccgtttgcttgatgaagaaaca
tatgtcgtttttgacgtcgaaacaaccggactttccgctgtgtatgatacgattattgaa
ctggcggctgtaaaagtgaaaggcggggagatcattgataagtttgagtcatttgccaac
ccgcatcgtccgctttcggcgacaatcattgaactgacaggcatcactgatgatatgctg
gtcgacgcgccggatgtaatagacgtgataagagatttcagagaatggattggcgatgat
attctcgtcgcccataatgcaagcttcgatatgggatttttaaacgttgctttcaaaaag
cttctccaagttgaaaaagcaaaaaatcctgtcattgatacactggagctcggccgtttt
ctttatccggaatttaagaatcaccggctgaacacgctgtgtaaaaagtttaacattgaa
cttacacagcaccaccgcgcgatctacgataccgaggcaaccgcttatttgcttttgaaa
atgctggaggatgctgctgaaaagggcattcagtatcatgaccagctgaatgaaaatatg
ggtcagtccaacgcttatcaaaggtcaagaccgtatcatgcaacagtgctggcggtgaac
agcacaggcttgaaaaacttatttaagctcgtttcactttcccatattcattatttttac
agagtgccgcgtattccaagatctcagcttgagaaatacagggaaggccttctgatcggt
tcagcttgcgacagaggagaggtttttgaaggcatgatgcaaaagtcgccggaagaggtg
gaggatgttgcgtcattctacgattatctcgaggttcaaccgcctgaggtgtaccgccac
ttgcttgagctagaactggttcgcgatgaaaaatcgctgaaagaaatcattacgaatatc
accaaactcggtgaaaagcttaataaacctgttgtcgcaacaggaaatgttcattatttg
aatgatgaggacaaaatttacagaaagattttagtatcctctcagggcggcgcgaatccg
ctgaacagacacgaactcccgaaagtgcatttcagaacgacagatgaaatgcttgaagcc
ttttccttcttaggagaagaaaaagcgaaggaaatcgttgtcaccaacacacaaaaggtt
gcgtctttaattgaagacatcaagccgattaaagatgatttatatacgccgaaaatcgaa
ggcgctgatgaagagatcagggaaatgagctatcagcgtgcacgaagcatttacggagag
cagctccctgaaatcgttgaagcgcgtattgaaaaagaactgaaaagtatcatcggccac
ggctttgctgttatttatttgatctctcataaactcgtaaagagatctctcgatgacggg
tatctggtagggtcacggggatcggtaggttcttcattagttgcgacacttactgagatc
acagaggtgaacccgctgccaccgcactatatatgtgctgaatgccagcattctgagttc
tttaatgacggatctgtcggttcaggttttgacctgcctgacaaaatgtgtcctcattgc
ggaacgcctttgaaaaaagacgggcacgatattccgtttgaaacgttcttgggatttaaa
ggggataaagtacctgatatcgatttgaacttctcaggggaatatcagccgcaggcccac
aattatacaaaagtattgttcggagaagacaacgtatatcgtgcgggaacgatcggcacg
gttgcagaaaaaacagcctacggttacgtaaaaggctatgccggcgacaataatctccat
atgcgcggcgccgaaatcgaccggcttgtgcaaggctgtacaggtgtaaaacggacgacc
ggacagcaccctggcggtattatcgtagttccggattatatggatatttatgatttctct
ccgattcagtttccggcagatgcgacaggttctgaatggaaaacgactcattttgacttc
cattccattcatgacaacctgctgaagcttgatattctggggcacgatgacccgacggta
atccgtatgcttcaagatttaagcggaattgatccgaaaacgattccgacagatgaccct
gaagtaatgaaaatcttccaaggaaccgaatcactcggtgtcacacaggaacagattgga
tgtaaaacgggcactctgggaattcctgaattcggaacccgctttgtccggcaaatgctt
gaagacacaaagccgacaacgttttctgagctcgttcagatttcagggctgtctcacgga
acagatgtatggctcggcaatgcgcaagagctcattcacaataatatttgtgagctgagt
gaggtgatcggctgccgtgatgacattatggtttatttaatctatcaagggctcgagccg
tcactggcgtttaaaattatggaatttgtccgtaaaggaaaaggtttaacgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtatatcgattcctgcaaaaagatt
aaatacatgttcccgaaagcccacgccgcggcttatgtattaatggcggtccgtatagct
tactttaaagtgcatcacgcgcttctgtattatgcggcttattttacggttcgtgcagac
gactttgatattgatacaatgatcaaaggctccacagcaatcaaagccgtaatggaggat
atcaactccaaagggcttgatgcgtcgccgaaggaaaaaaaccttctcacagtattagaa
ttagcgctggaaatgtgtgaaagaggctattcattccaaaaagtcgatttataccgctcc
agcgcaacggaatttattattgacggcaacagcctgatcccgccgtttaattctattcct
ggattaggtacgaacgccgctctaaatattgtaaaggcccgtgaagaaggagaatttctc
tcaaaagaagatttgcaaaagagagggaaagtatcaaaaacgattttagagtatttagat
cgtcacggctgtttggagtcattgccggatcaaaaccaattatcgctgttttag
DBGET
integrated database retrieval system
