Bacillus infantis: N288_18845
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Entry
N288_18845 CDS
T02860
Name
(GenBank) recombination protein RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bif
Bacillus infantis
Pathway
bif03410
Base excision repair
bif03430
Mismatch repair
bif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N288_18845
03430 Mismatch repair
N288_18845
03440 Homologous recombination
N288_18845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_18845
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N288_18845
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N288_18845
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N288_18845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGX05647
UniProt:
U5LGC2
LinkDB
All DBs
Position
complement(3443175..3445541)
Genome browser
AA seq
788 aa
AA seq
DB search
MLKSKTRWIVRQSDKDKADTLISELKISPIVASLLVNRGLDTPESAQDFLYGNNGEFHDP
FLLAGMDAAVSRINKAINENEPILIYGDYDADGVTSTSVMMITLRSLGANVDFYIPNRFT
EGYGPNEGAFRHAAEIGTKLLITVDTGISAVHEASIAKELGMDLIITDHHEPGPVLPEAL
AIIHPKLEGSLYPFRELAGVGVAFKVAHALLGNIPEELLEIAAIGTVADLVSLKGENRLL
VQRGIKKLKVTKRAGLLALFKLANVEQAAVDEETIGFMLAPRLNAAGRLDSADPAVHLLL
TDDREEAAMIAEEIDSMNKERQSIVSQIAEEAIKEVEEKYPAGENAVLVIGKEGWNAGVI
GIVASRLVDKFYRPAIVLSFDKEKGTAKGSARSIAGFDLYKNLSACRDILPHFGGHPMAA
GMTLGLGDVGELRERLNGLAKEQLSDEDFIPVASLDAEVSLEDVSLPAIEQMQLLSPFGM
DNPKPRVLIKDAPIASMRKIGSGQNHLKMALGEGSSALDGIGFGLGELFHHISADSRISV
IGELSINEWNNIRKPQIFLHDLSVAEWQLFDLRGIKRFEQLKELLPESSTKWICFDGQSR
EKIPSLPEDAAFFISSETEAEALVIEEEHIVLADLPPSKQMLEKLLQGKAPARIYAHFYK
EESEYFSTIPNRDHFKWFYSFLAKRGQFDIRKFGDQLAKHKGWSRETIDFMSKVFFELDF
AKMENGLLALNKEANKRDLTESPTYQRKHAQYTLENDLLYSSYQELKSWFDAVLQGAVHT
EEAMEEWI
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtcaaaaacaagatggattgttcgtcaatcggataaagataaagctgacaca
ctgatcagcgaattgaaaatcagtccaattgtggcatcattattagtgaatcgggggctc
gatactcctgaatcggcacaggatttcctgtacggaaataatggggagttccacgaccct
tttctcctggccgggatggatgctgcagtctcacgaataaataaagcgataaacgaaaat
gaaccgattttaatatatggggattatgatgcagacggagtcacaagcacctctgttatg
atgataacgctccgcagcctgggtgccaatgtagatttctacatacctaaccggtttacg
gagggatacggcccgaatgagggagcattcaggcatgcggccgaaattggcaccaagctg
ctcattacggtggataccggcatatcagcagtccatgaggcgtccattgccaaagagctg
ggcatggacctgatcattacggaccaccatgaacccggtccggttctcccggaggccctg
gctatcatccatcccaagcttgagggaagcctttatcctttccgcgagcttgccggagtg
ggcgtggcctttaaggtagctcacgccctattgggaaatatccccgaggagcttctggaa
attgctgctataggaaccgtggccgacctggtatctctgaaaggagagaacaggctcctt
gtccagagagggatcaagaagctgaaggtgactaaaagggccggcctgctcgcgctgttc
aagctggcaaatgtggagcaggctgcagtagatgaagaaaccatagggttcatgcttgct
ccaaggctgaatgctgccggcaggctggacagcgcagatccggccgtccatctgctgctg
acagatgaccgggaagaagcagctatgattgctgaagaaattgacagcatgaacaaagag
aggcagtccattgtcagccagattgccgaagaggcaatcaaagaagtcgaggaaaagtac
ccggcaggggaaaatgctgttctcgttatcgggaaggaaggctggaatgccggtgtgatc
ggcattgtagcgtcaaggcttgtcgataaattctacaggccggccatcgtcctcagcttt
gataaagaaaaggggacggcaaaaggatctgccagaagcatagccggatttgatttgtat
aaaaatctgtctgcctgcagggacatcctgccccattttgggggccatccgatggctgct
gggatgacgcttgggcttggagacgtgggggagctgcgggaaaggctcaacggcctcgcg
aaagagcagctcagtgacgaggatttcataccggtcgcaagcctcgatgccgaggtaagc
cttgaagatgtcagcctgcctgcgatagaacaaatgcagcttctttccccctttggaatg
gacaatcctaaaccgcgcgtcctgattaaggatgcccccattgccagcatgcgcaagata
ggctccggccagaatcatcttaaaatggcacttggcgagggttcatccgcattggacgga
atcggattcggccttggggagctgttccatcatatctcggcagattcccggatatccgta
attggtgaattatctataaatgaatggaataatataagaaaaccgcaaatttttctgcac
gatttatctgtcgccgaatggcagctttttgatctgagaggaatcaagagatttgaacag
ctaaaggaactccttcctgaatcaagtaccaagtggatatgctttgacggccaaagccgg
gaaaagattccttcattgccggaagatgcagctttcttcataagctctgaaacggaagcg
gaagctctggtgattgaagaagagcatatagttcttgcagatctgcctccttcaaaacag
atgctggaaaagctccttcagggcaaagcccctgccaggatctatgcccacttctataag
gaagaaagcgagtatttcagcacgatcccaaacagggaccattttaagtggttttattca
ttcctggccaaaagaggccaattcgacataagaaaattcggggaccagcttgccaagcat
aaaggatggagcagggaaacaattgattttatgtcaaaggtgttttttgagctggacttt
gctaaaatggaaaatgggctcttggcccttaataaagaggcaaacaagcgggacctgaca
gaatccccgacatatcaaaggaagcatgcacaatacacccttgaaaacgatttgctgtat
tcttcataccaggagctgaaaagctggttcgatgcagtccttcaaggggcggttcatact
gaggaggcaatggaagaatggatttga
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