Bos indicus (zebu cattle): 109573325
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Entry
109573325 CDS
T04792
Symbol
BPTF
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109573325 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109573325 (BPTF)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
109573325 (BPTF)
NuRF complex (fruit fly)
109573325 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
Bromodomain
DDT
WSD
WHIM1
PHD_5
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
109573325
NCBI-ProteinID:
XP_019836045
UniProt:
A0A6P5DF32
LinkDB
All DBs
Position
19:complement(50499685..50600670)
Genome browser
AA seq
2999 aa
AA seq
DB search
MACALKKLTHELRTRRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIY
EVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADL
KDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAEDYPYGPVENKIKVLQFLVDQ
FLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQ
CEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKK
IWYYSTKVQLAELIDCLDKDYWEAELCKILEEMREEIHRHMDITEDLTNKARGSNKSFLA
AANEEILESIRAKKGDIDIVKSPEEIDKDKNETETSNSKDAEKSREEFEDQIVEKDSDDK
TPDDVDPEQGKSEEPTEVGDKGNSVSANLGDNTTNASSEETVPSEGRSPMGCVSETHDSS
NMAEKKVASELPQDVPEEPNKTCDSSNPSATTASIQPNLEHSNSSSELSSSQSEPXKAAD
DPENGERESHTPVSIQEEIGDFKSEKSNGEISESPGGGRGASGSTRIITRLRNPDSKLSQ
LKSQQVAAAAHEANKLFKEGKEVLVVNSQGEISRLSTKKEVVMKGNINNYFKLGQEGKYR
VYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLT
ITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWRES
LGHTRLHRMTSIEREEKEKVKKKEKKQEEEETMQQATWVKYTFPVKHQVWKQKGEEYRVT
GYGGWSWISKTHVYRFVPKLPGNTNVHYRKSVEGVKNNMDENMDESDRRKSPRSPKKIKT
EPDSEKGEVKDSDAAKGADQSEMDISKVTEKKDQDVKEVLDSDNDKSFKEEPMEIDDDVK
TESHVNCQESSQVDVVNVSEGFHLRTSYKKKIKSSKLDGLLERRIKQFTLEEKQRHEKMK
LEGGIKGSGKTPTSSVKSLSESPVITKVKEGCQSDLLTQEQSSNTSNDKSEDSTRGCSQS
DSSILGITDPDHTANKLYSKDQMLEDVSIQSADTHCQKQNSVRNDMDEGLSDPASEGQEP
XKMKTKGTDFLIDDPKLASADEIGTLIYKNRKPFIQEDNDTTVCPSQSPLLPSVPKSTDD
RDIPSLSKAVDFEGKLGCDSEYNSTLENSSDTMSVQDSSEEDMIVQNSNESISEQLITQE
QGSEGFEPLKREFVSDKTTGSCDDRLQSKVNDANGRKPSQDQKLEDRPLNKCIDQNSLKS
VTDKKNNENRESEKKGQKASTFQINGKDNKAKVYLKGECLRDISESKIGSGDIEPKVNNI
NKIIPENDIKPLTVKESTVKPFMNGDVIMEDFNEKNNLETKSCLLRSSDAEGDYHDSLET
LPSTKESESAQAAMPLPSCPEGSSSNQVEDMEIDISKVKKVTSSPVTSGEESNLSNDFID
ENGLPTNKDENVNGEPKRKTVITEVTTMTSTVATESKTVIKVAKGDKQTVVSSTENCAKS
TVTTTTTTVTKLSTPSAGSDVDIISVKEQSKTVVTTTVTDSLTTAGGTLVTSMTVSKEYS
TRDKVKLMKFSRPKKTRSGTALPSYRKFITKSSKKSIFVLPNDDLKKLARKGGIREVPYF
NYNAKPALDIWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWASLRWDDMAAKAPPG
GGTTRTETSETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPEAPKETPTPQRKGLR
SSALRPKRPETPKQTGPVIIETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKVSEQKK
AEDFKAQMEAHLKQQRLAAQQKRLEQQKPTVIAASTTSPTNSTTSTISPAQKVMVAPISG
SVTTGTKMVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQSNSATSTAATSATTIASTGQ
TFQITGNPVTMAGKVITKLPLPANSKIVAVNVPATQGGVVQVQQKVLGIIPSSTGASQQT
FTSFQPRTATVTIRPNTSGSGGTTTTSQVITGPQIRPGMTVIRTPLQQSTLGKAIIRTPV
MVQPGAPQQVVTQIIRGQPVSTAISAPSTVSSTPAQKGLSSGTSTANLQPSTSQPPRPQQ
GQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTILPGPGQQLMQAAMP
NGTVQRFLFTPLATTAATTSSTTTTVSTTAAGTSEQRQSKLSSPTQVQPAKSLPPAPPSS
VSPPEAQPQPAQPAQPSAQPSAQPQPQTQXPSPAQPETQTQPEVQTQTTVASHVPPEAQP
TQAQSSKPQVAGQCPPQSNVQGQSPARVQSPPQTRVRPSTPSQVSPGQQAQGQTPASQPI
PIQPHTSLPTPSQGQPQSQPQVQSSTQTLSPGQTLSQVAVSSPPRPPLQVPQPQPQVLAV
PQLPPQVQVLSQIQPQVVAQIQAQQGGVPQQIKLQLPVQIQQSSPVQTHHIQNVVAVQAA
SVQEQLQRVQQLRDQQQKKKQQQIEIKREHTLQASNQSEIIQKQVVMKHNAVIEHLKQKK
TMTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQKRSKQNASKLSALL
FKHKEQLKAEILKKRALLDKDLQIEVQEELKRDLKIKKEKDMVQATAVAATCXXAPPAPP
APPPSPPPPPPPQHPGPLATATTTLPVASQKRKREEERDSNSKSKKKKMISTTSKETKKD
TKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCKRAQEGNSEE
LYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTP
LTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYE
KLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASRSHNNKLQSTAS
NT seq
9000 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgctctcaagaagttaacacatgagctgaggacccgtaggcgaaaaccaaga
gtacatcggcctcgctctccaatattggaagaaaaagacatcccgccccttgaatttccc
aagtcctctgaggatttaatggtgcctaacgagcatataatgaatgttattgccatttat
gaggtactgcggaactttggcacggttctaaggttatctccttttcgcttcgaggacttc
tgtgcggctctggtgagtcaagagcagtgcacacttatggcagagatgcacgttgtgctt
ttgaaagcagtcttgcgtgaggaagacacttccaatactacctttggacccgccgatctg
aaagacagcgtgaattccacgctgtatttcattgatggcatgacgtggccagaggtgctg
cgggtgtactgtgagagtgacaaggagtaccatcacgttcttccttaccaggaagcggag
gactacccttacggaccagtggagaacaaaatcaaggttctgcagttcctagtggatcag
tttctcaccacaaacatcgcccgtgaggagctgatgtctgaaggggtgatccagtatgac
gaccactgtcgggtctgtcacaaactcggggatttgctttgctgcgagacctgctcggcg
gtgtaccatttggaatgcgtgaagccgccgctcgaggaggtgccggaggatgagtggcag
tgtgaagtctgtgtagcacataaggtgcctggtgtgactgactgcgttgctgaaatccaa
aaaaacaaaccctatattcgacacgaacctatcggatatgacagaagtcggaggaaatac
tggttcttaaaccggagactcataatagaagaagatacagaaaatgaaaatgaaaagaaa
atttggtactacagcacaaaggtccaacttgcagaattaattgactgtctagacaaagat
tactgggaggcagagctctgcaaaattctagaagaaatgcgtgaagaaatccaccggcac
atggacataactgaagacctgaccaataaagctcggggcagtaacaaatcctttctggcg
gcagctaatgaagaaattttggaatccataagagccaaaaagggagacattgatattgtt
aaaagcccagaagaaatagacaaggacaagaatgagactgagactagtaactccaaagat
gctgagaaaagcagagaggaatttgaagaccagattgttgaaaaagacagtgatgacaaa
acaccagatgacgtcgatcccgagcaaggaaaatctgaggagccaacagaagttggggat
aaaggtaactctgtgtcagcaaatcttggcgacaacacaacaaatgcttcttccgaagag
actgttccctctgaagggaggagtcccatggggtgtgtctcagaaacccacgatagcagc
aacatggcagagaagaaggtggcatctgagctcccccaggacgtgccagaagaacctaac
aagacatgtgacagcagtaaccctagtgccaccactgcctccatccagcctaacctggag
cacagtaacagcagcagtgagctaagctcttcccagagcgagcctrccaaggcagccgat
gaccctgaaaatggagaaagagagtcccatacacctgtctctattcaagaagagataggt
gatttcaaatcagagaagtctaatggggaaataagtgagtctcctggaggaggaagagga
gcatctggttcaactcggattatcaccaggttacggaacccagacagcaaactgagtcag
ctgaagagccaacaggtggccgctgcagcccatgaagcaaataaattatttaaggagggg
aaagaggtactggtagttaactctcaaggagaaatttcacggttgagcaccaaaaaggaa
gtggtcatgaagggaaacatcaacaattatttcaagttgggtcaagaggggaagtatcgc
gtctaccacaatcagtactccaccaattcatttgctttgaataagcatcagcacagagaa
gaccatgataagagaagacatcttgcacataaattctgcctgactccagctggagagttc
aaatggaatggttctgtccatgggtccaaagttcttactatatctacyctgagactgact
atcacccagttggaaaacaatatcccttcctcctttcttcatcccaattgggcttcgcac
agggcaaattggatcaaggctgttcagatgtgtagcaaacccagagaatttgcattggct
ttagctattttggagtgtgcagttaagcccgttgtgatgctgccaatatggcgggaatct
ttaggacataccaggttacatagaatgacatcaattgaaagagaagaaaaggagaaagtc
aaaaaaaaggagaaaaaacaagaagaggaagaaacaatgcaacaagctacatgggtaaaa
tacacatttccagttaaacatcaggtttggaaacaaaaaggagaggaataccgagtaaca
ggatacggtggttggagctggattagtaaaactcatgtttataggtttgttcctaaattg
ccaggcaataccaatgtgcattacagaaagtcagtagaaggagttaaaaataacatggat
gaaaatatggatgaatcggatagaaggaaaagtccacgaagcccaaaaaagataaaaaca
gagcctgattctgagaaaggcgaggtaaaagactctgatgctgcaaaaggagcagaccaa
agtgaaatggacatttcaaaggttactgagaagaaggatcaagatgtaaaagaagtttta
gattctgacaatgataaatcctttaaagaagaaccgatggaaatagatgatgatgtgaaa
acagagtcccatgtaaattgtcaggaaagctctcaagtagatgtggtcaatgtcagtgag
ggttttcatctaaggactagttataaaaagaaaatcaaatcatccaaactagatggactt
ctggaaaggagaattaaacagtttacactggaagaaaaacaacgccacgaaaaaatgaag
ttggagggtgggattaaaggttcgggaaagacccctacaagttctgtgaaaagtctgtct
gagtcaccagtcataacgaaagtaaaagaaggatgtcagagtgacttgcttacacaagaa
cagagctctaacacaagtaacgataaatccgaagactcaactcggggatgttcacagagt
gattcctcaattcttggaatcactgaccctgatcatacagcaaacaaactttattcaaaa
gatcaaatgttagaggatgtctccattcagagtgcagacacacactgtcaaaaacaaaat
tctgttcgaaatgacatggacgagggtctctctgaccctgccagtgaaggccaggagccc
agwaagatgaaaacaaaaggaactgattttctcattgatgaccctaaactagctagcgca
gatgaaattggcactttgatctataagaacagaaaaccattcatacaggaagataatgac
accactgtgtgtccctcccagagccctttgcttccatcagtacctaaaagtactgatgat
agagatatcccgtctctgtcaaaagcagtagactttgaaggaaaactgggatgtgactct
gaatacaatagcactttggaaaatagttctgatactatgtctgttcaggacagcagtgaa
gaagatatgattgttcaaaatagcaatgaaagtatttctgaacagttaataactcaagaa
caaggtagtgaaggctttgaaccactgaaacgtgaatttgtttcagataagactactgga
agctgtgatgacaggctgcagagtaaggtaaatgacgcaaatggtagaaagccaagtcaa
gatcagaaactagaggatagaccacttaataaatgtatcgatcaaaacagtctgaaaagt
gtcactgataaaaagaataatgaaaaccgagagtctgaaaagaaaggacagaaagcaagt
acctttcaaataaatggaaaagataataaagctaaagtatatttgaaaggtgaatgcttg
agagacatctctgagagtaaaataggaagtggtgacattgaaccaaaggttaataatata
aataaaattattcctgaaaatgatatcaagcctttgactgttaaagaatctactgtaaag
ccattcatgaatggtgatgtcatcatggaagattttaatgaaaaaaacaacttggaaaca
aaatcatgtttactgaggtcttcggatgctgaaggtgactaccatgatagcctggagaca
ctgccatcaaccaaagagtctgagagtgcccaggccgccatgcctctgccgtcttgtcca
gaaggcagttcatccaatcaggtagaagatatggaaattgacatctccaaagttaagaaa
gttacttcgtcccctgttacttctggagaggaatctaacctcagtaatgattttattgat
gaaaatggcctgcccaccaacaaagatgaaaatgtcaatggagaacctaaaagaaaaacg
gtcatcacagaagtcaccaccatgacgtccacagtggccacagaatcaaaaaccgtaatt
aaggtagcaaagggcgataagcagactgtggtctcttccacggaaaattgtgccaagtcc
actgtcacgaccaccactacaacagtaaccaagctttccacgccctctgcaggcagtgac
gtggacatcatctctgtgaaggagcagagcaaaactgtggtcaccacaacagtgacagac
tcgctgaccaccgcaggaggcactctggtaacatctatgaccgtgagcaaagaatattcc
acaagagacaaagtgaaactcatgaagttttcaagacccaaaaagactcgttcaggtaca
gctctgccatcgtacagaaagtttatcaccaagagcagcaagaagagcatatttgttttg
cccaatgatgacctaaaaaaattggccagaaaaggaggaatccgagaagtcccttacttt
aattacaatgcaaaacctgccttggatatatggccatatccttctcctagaccaaccttt
ggtatcacttggaggtatagacttcagactgtgaagtccttagctggagtgagtcttatg
ttgcggttactgtgggcaagtctgagatgggatgacatggcagctaaggctcctccagga
ggagggaccacacggacagaaacatcagaaactgaaatcacaacgacagaaataattaag
aggcgagatgttggtccttatggcattcgatctgaatattgtatcaggaaaatcatttgc
cccattggagttccagaagcaccaaaagaaacacctacacctcagaggaaaggccttcga
tcaagtgcgctgcggccaaagagaccagaaacgcccaagcaaactggccctgttattatc
gaaacctgggtggcagaggaagagctggaattatgggagatcagggcatttgctgaaaga
gtggagaaagaaaaggcacaagcagttgagcaacaggctaaggttagtgaacagaagaag
gcagaggacttcaaggcccaaatggaggctcacctcaaacagcagcgattggctgcccag
cagaaacgattggaacaacagaagcctacagtgattgcagcttctactacttccccgaca
aacagcacgactagtaccatctctccagcacagaaagtcatggtggcccccataagtggc
tcggttacaactggaactaaaatggtactaacractaaagtcgggtctcccgctacagta
acattccagcagaacaagaactttcatcaaacctttgccacctgggttaagcaaggccag
tcaaattcagccaccagcacagctgccacatctgctacaaccattgccagcacaggtcag
acgttccaaattacaggcaatccagtcactatggcaggaaaagtaattaccaaacttcca
cttcctgcaaacagcaagattgtcgctgtaaatgtgccagcaacacaaggaggcgttgtt
caagtacagcagaaagtcctgggtatcattccatcgagtacaggtgcaagtcagcaaacc
tttacttcattccagcccaggacagcaacagtcaccattaggcccaatacctcaggctct
ggaggaaccacaaccacttcccaggtcatcacagggcctcagatccgccctggtatgacg
gtgattagaactccactccagcagtcaacactaggaaaggcaattattcgaacacctgtg
atggtacagccaggtgctcctcagcaggtggtgacacagatcatcagagggcagcctgtc
tccactgcgatctctgcccctagtaccgtttcctccacacctgcacagaaagggttatct
tcaggaacatccactgcgaatctgcagccttcaacctcacagccccctcgtccccagcaa
ggacaggtgaaacttaccatggctcagctcactcagttaacacagggccacggtggcaat
caaggtttgacagtagtgattcaaggacaaggtcagactactgggcagttgcagttgata
cctcaaggggtgactatacttccgggtccaggacagcagctgatgcaagctgcaatgcca
aatggtaccgttcagcgattcctcttcaccccactggcaaccacagctgccaccaccagc
agcaccaccaccaccgtctctactacagcagcaggtacaagtgaacaaagacagagtaaa
ttatcatccccgacacaggtgcagccagccaaaagcctgcctccagctccgccgtcgagc
gtgagtcctccagaagcccagcctcagcctgcgcagcccgctcaaccttcagctcagcct
tcagctcagccccagccccaaacccagyccccatccccagctcagcctgaaactcagact
cagcctgaagttcagacccaaacaactgtggcctcccatgtccctcctgaagcacagccc
acccaagcacagtcctccaaaccccaggttgcaggacagtgtccgcctcagagcaatgtc
caaggacagtctcctgctcgcgtccagagcccaccacagactcgagtacgtccatcgacg
ccatcccaagtgtctcccggacagcaggcccagggtcagactccagcctcccaaccgatt
ccaatccagccacatacatctcttccgacaccttcccagggccagccacagtcacaaccc
caggtacagtcttcaactcaaactctttcaccaggacaaacgttaagtcaagttgctgtt
tcatccccgccccgtcctccgctccaagtaccgcagcctcagccccaagtcctggctgtg
ccgcagctgccaccacaagtccaggttctctcccagatccagccgcaggttgtggctcag
atacaggctcagcaaggtggtgtgccccagcagatcaaactccagttacccgttcagatt
cagcagagcagccctgtgcagactcaccacattcagaatgtggtcgcagtgcaggcagcc
agtgtgcaagagcagttgcagagggttcagcaactcagggatcagcagcaaaagaagaag
cagcaacagatagaaattaagcgggaacacaccctccaagcttctaatcaaagtgaaatc
attcagaaacaggtggtgatgaagcataatgctgtaatagaacatttaaaacagaaaaag
accatgactccagcagaaagagaagagaatcaaagaatgattgtctgtaaccaggtgatg
aagtatattttggataagatagataaagaagaaaaacaggcagcaaaaaaamggaagcga
gaagagagtgtggaacagaaacgtagcaaacagaatgccagcaagctctctgccctgctc
ttcaagcacaaagagcagctcaaagctgaaatactgaaaaagagagcgctgctcgacaaa
gatctacaaattgaagtgcaggaagagctcaagagggacctgaaaattaagaaggaaaaa
gacatggtgcaggccacagcagtagctgccacctgcnnnnnagcaccgcccgcacctcca
gcccctccgccttcgcctccacctccgcctcccccacagcacccgggccctctggccacg
gccacgaccacgctgcctgtggcttcccagaaaaggaagcgggaagaggagagagactcc
aactccaagtccaagaagaagaaaatgatctctactacctcaaaggaaactaagaaggac
acaaagctttactgtatctgtaaaacgccttacgatgaatctaagttctatattggctgt
gatctttgtactaactggtatcatggagaatgtgttggcatcacagaaaaggaggctaag
aaaatggatgtgtacatctgtaatgattgtaaacgggcacaagagggcaacagtgaggaa
ttgtactgtatctgcagaacaccttatgatgagtcacaattttatatcggctgtgaccgg
tgtcagaattggtaccatgggcgctgcgttggcatcttgcagagtgaggcagagctcatt
gacgagtacgtctgtccacagtgccagtcaacagaggatgccatgacggtgctcacgccg
ctcacagagaaagattatgagggtctgaagagggtgctgcgttctttgcaggcccataag
atggcctggcctttccttgaaccagtggatcctaaygacgcaccagattattacggtgtt
attaaggaacctatggaccttgccaccatggaagaaagagtacaaagaagatattatgaa
aagctgacggaatttgtagcagatatgaccaaaatttttgataattgtcgttactacaat
ccaagtgactctcctttttaccagtgtgcagaagttcttgaatcattctttgtacagaaa
ttgaaaggattcaaggctagcaggtctcataacaacaaactgcagtctacagcttcttaa
DBGET
integrated database retrieval system
