Bradyrhizobium japonicum E109: RN69_22340
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Entry
RN69_22340 CDS
T03509
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bjp03032
]
RN69_22340
03400 DNA repair and recombination proteins [BR:
bjp03400
]
RN69_22340
Enzymes [BR:
bjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RN69_22340
DNA replication proteins [BR:
bjp03032
]
Prokaryotic type
DNA Topoisomerases
RN69_22340
DNA repair and recombination proteins [BR:
bjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RN69_22340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Milton
Motif
Other DBs
NCBI-ProteinID:
AJA62774
UniProt:
A0AA87QQQ7
LinkDB
All DBs
Position
complement(4705161..4707908)
Genome browser
AA seq
915 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVLKEKRALKDQKIERVVFNAITKQAV
TDAMKNPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDVGSGAEAEDFKKALEAA
AYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPEAPRQYQAKAKNAQEAHEAIRPTDMSR
RPDSMSRKLDADQARLYELIWKRTIASQMESAELERTTVDITAKAGSRTLELRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPAMSPNDALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFNRYVEYDFTANLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDEIKDLRVAQVLDVLDDMLGQHIYPPRADGGD
IRQCPSCGNGRLNLKAGKFGAFVGCSNYPECRYTRQLAADSETTADRSLGQDPDTGRDVW
VKAGRFGPYIQLGEPKDYEEGEKPKRAGIPKGTSPGDVELELALKLLSLPREIGKHPETG
QPITAGLGRFGPFVKHEKTYASLESGDEVFDIGLNRAVTLIAEKVAKGPSRRFGADPGKA
IGDHPTLGTVTVKSGRYGAYVTAGGVNATIPAEFEKDTVTLPQAIALIDERAAKGGGKTK
AKKAAKPAKAKKAAEKAADGDDAAPKPKKPAAKKAAKPKSESTSKARAAVSSTAKTSPTK
AAAPKAPAKKSAGKT
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaagtatctgggc
tcgtcctacgaggttctggcctcgttcggccatgtccgcgacctcccggcgaagaacggt
tccgtcgatccggacgcaaatttcaagatgatctgggaggtcgaccccaaggcggccggc
cggctcaacgatatcgccaagtccctgaagggcgccgaccgcctgattctggcgaccgac
cctgatcgcgagggcgaggccatctcctggcacgtgctggaggtgctgaaggaaaagcgc
gcgctgaaggatcagaagatcgagcgcgtggtgttcaacgccatcaccaagcaggcggtc
acggatgcgatgaagaatccgcgccagatcgacggcgcgctggtcgacgcctacatggcg
cgccgggcgctggactatctggtgggcttcaccctctcccccgtgctctggcgcaagctg
ccgggcgcccgctcggccggccgcgtgcagtcggtggcactgcggctggtctgcgaccgc
gagctcgaaatcgagaagttcgtgccgcgcgaatactggtcgctgatcgcgacgctgctg
acgccgcgcggcgacgccttcgaggcgcgcctcgtcggcgccgacggcaagaagatccag
cgcctcgacgtcggcagcggcgcggaagccgaagacttcaagaaggcgctggaagcagcc
gcctatgccgtgaccgcggtcgatgcgaagccggcccggcgcaatccgcaggcccctttc
accacctcgacgctgcagcaggaagccagccgcaaatacggttttgcgccagcacacacg
atgcgcatcgcgcagcgcctttatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgatccgtccgcgatcacccaggcgcgc
aaggtgatcggcgaggattacggcaacgcctatgtgccggaggccccgcgccagtatcag
gccaaggccaagaatgcccaggaagcgcacgaagcgatccgtccgaccgacatgtcgcgc
cgccccgacagcatgagccgcaagctcgacgccgaccaggcgcgactctatgagctgatc
tggaagcgcaccatcgcgagccagatggaatcggccgagctcgagcgcaccaccgtcgac
atcaccgcgaaggcaggctcccgaacgctggagctgcgtgcgacgggtcaggtcgtcaag
ttcgacggcttcctcgcgctctaccaggaaggccgcgacgacgaggaagacgaggattcg
cgccgtctgcccgcgatgagcccgaacgacgcgctcaagcggcagtcactcgccgtcacc
cagcacttcaccgagccgccgccgcgcttctcggaggcctcgctggtcaagcgcatggaa
gagctcggcatcggccgtccctcgacctatgcctcgatcctccaggtcctgaaggaccgc
ggctacgtcaagctggagaagaagcgccttcacggcgaggacaagggccgcgtcgtggtc
gccttcctcgaaagcttcttcaaccgctacgtcgaatacgacttcaccgccaatctggag
gagcagctcgaccgcatctccaacaacgagatctcctggcagcaggtgctgaaggacttc
tggaccggcttcatcggcgccgtcgacgagatcaaggatctgcgcgtagcccaggtgctc
gacgtgctcgacgacatgctgggccagcacatctatccgccccgcgccgatggcggcgat
atcaggcagtgcccgagctgcggcaacggccggctcaatctcaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgctacacccgccagctcgccgccgac
agcgagaccaccgccgaccgttcgctcggccaggatcccgacaccggtcgcgatgtctgg
gtcaaggccggccgctttgggccctacatccagctcggcgagcccaaggattacgaggaa
ggcgagaagccgaagcgcgcgggcatcccgaagggcacctcgcccggcgatgtcgagctc
gagcttgcgctgaagctgttgtcgctgccgcgcgagatcggcaagcatccggagaccggt
cagccgatcacggcaggactcggccgtttcgggccgttcgtgaagcacgagaagacctac
gccagcctggagagcggcgacgaggtcttcgatatcggcctcaaccgcgcggtgacactg
atcgcggaaaaggtcgccaagggcccgagccgtcgcttcggcgccgaccccggcaaggcg
atcggcgatcatccgaccctcggcaccgtcacggtgaagagcggccgttacggcgcctat
gtcacggcaggcggcgtcaacgcgacgatcccggccgagttcgaaaaggacaccgtcacg
ctgccgcaggcgatcgcgctgatcgacgagcgcgcggccaagggcggcggcaagaccaag
gcgaagaaagccgcgaagccggccaaggccaagaaggctgcggagaaggccgcggacggc
gatgacgccgcgccgaagccgaagaaaccggccgcgaagaaggcggccaaacccaaatcc
gaatccaccagcaaggcgcgcgccgccgtgtcgtcgaccgcaaaaacgtcgccgaccaag
gccgccgcccccaaggctccggccaagaagagtgccggcaagacctag
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