Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0457
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Entry
BBKW_0457 CDS
T04223
Name
(GenBank) transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bks03000
]
BBKW_0457
Transcription factors [BR:
bks03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BBKW_0457
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
HTH_IclR
HTH_3
TMP_3
HTH_36
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BAQ28592
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Position
complement(556454..557473)
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AA seq
339 aa
AA seq
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MRNTAKKATVRLSDIAKETGYSLSTVSKALNGRADVSEETRQTINAVLKRYGYSRKATGA
KSQRIIEIVFQDFDNVWALEVLRGAIREAKLHDLSVITTEGGNRQHPDSSWIDNMLRRQT
DGAILVFSSLTRIERNKLHSRGIPFVLFDPFGNPDPDTLSVQADNWTGGVIATRHLLALG
HIRIGIITGPEKMMCSKARLDGYTSALAERGIETNPELITEGDFTTTGGYAQAISLLEQP
NRPTAIFAGSDLQAMGVYEAARQLGLRIPEDLSVVGFDDVQTAAFLGPALTTVRQPLQDM
ARAAVRMLVEALSTDDVIQPHIIMPTSLVVRNSTQQLEG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatacggcaaagaaagctacggtacgactctctgacatagctaaagagaccggt
tattccctttccaccgtatccaaggcgctcaacggcagagccgacgtttccgaagagacg
cggcaaaccatcaacgcggtgttgaaacggtatgggtattcccgtaaagcgacaggcgcg
aaaagccaacgaattatcgaaatcgtgttccaagatttcgataatgtttgggcccttgaa
gtactccgtggcgccattcgcgaagccaagttgcatgatttgagcgtcatcaccaccgaa
ggcggcaatcgccagcacccggactcatcctggattgacaatatgctgcgtcggcagacg
gatggcgccattcttgtcttctccagtctgacacgtatcgagcggaacaaactgcattcc
agaggtattcccttcgtcttgttcgatccattcggtaatccagatccagacacgctgtcg
gtgcaagcggacaactggaccggaggcgtaatcgccaccaggcatctgcttgcgctcggg
catattcgcataggcattatcacaggacccgagaagatgatgtgctccaaagctcgttta
gacggttacacgtcagctctggcggagcgtggcatcgaaacaaatcccgaactcattacc
gaaggtgatttcaccaccaccggaggttatgcacaagccatctcccttttggaacagcca
aatcgtccgaccgcaatcttcgccggcagcgatctgcaggccatgggcgtctacgaggcg
gcaaggcagctgggattacgtattcccgaggatttatccgtggtcggattcgacgatgtg
cagactgccgcattccttggcccggcgctgaccaccgtacgacagccgctccaagacatg
gcaagggccgccgtacgcatgctggtcgaggcgctgtccaccgacgacgtgatccaaccg
cacatcatcatgccgacatcgctagtggtacgcaacagcacacagcaactcgagggttaa
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