Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1552
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Entry
BBKW_1552 CDS
T04223
Name
(GenBank) putative adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBKW_1552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bks03400
]
BBKW_1552
Enzymes [BR:
bks01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
BBKW_1552
DNA repair and recombination proteins [BR:
bks03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBKW_1552
Prokaryotic type
BBKW_1552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF2568
Motif
Other DBs
NCBI-ProteinID:
BAQ29687
LinkDB
All DBs
Position
complement(1842107..1843054)
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AA seq
315 aa
AA seq
DB search
MMNDTNGNNAEIENAEAVAVALAEWWHASARDLPWRFGRATPWGVLVSEVMSQQTQMSRV
VPYWNDWMERWPDAAALAGAAKSDVITAWGRLGYPRRALRLQECARVVASDYGNELPQTY
DELLALPGIGDYTASAVMSFAFGERIAVVDTNIRRVLSRVFLGVESLGGAASPAERALAK
QVLPQDGASKCRRFDRSSVVWNQSVMELGAIVCTAKSPLCEACPVSSRCVFLRDGRPGLG
ERRTRPRQRFQGTDRQVRGLVMNALRNLPEGEIAVDRKSLERLWNDHIQLDRCIASLDED
GLIEILPNADVRLPV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgacacgaacgggaataatgcagaaatcgaaaatgccgaagctgtggcggtc
gcgctcgccgaatggtggcatgcttcggcgcgtgaccttccgtggcgattcggccgtgcc
acgccatggggtgtgcttgtttccgaggtgatgagccagcagacgcagatgagccgtgtg
gtgccgtattggaacgattggatggagcgttggcctgatgcggctgcgcttgcaggtgct
gcgaaatctgatgtgatcactgcttggggcaggcttgggtaccctcggcgtgcgttgcga
ttgcaggaatgcgctcgtgtagtcgcttccgactatggcaatgagctaccgcaaacatac
gatgagctgttggctctgccgggtatcggcgattacacggccagcgcggtgatgagtttc
gcattcggagagcgcatcgcggtggtagatacgaatattcgcagggtgctttcgagggtt
tttcttggtgtggagtcgcttggtggtgctgcgagccctgctgagcgtgcgttggcgaag
caagtgttgccgcaggatggtgcgtcgaaatgcaggcggttcgaccgttcttcggtggtg
tggaatcagtcggttatggaattgggtgcgattgtgtgtacggcgaaatcgccgttgtgt
gaggcgtgtccggtttcttcgcggtgtgtgtttttgcgtgatggacgcccgggattgggg
gaacgtcgtacaaggccgcgccagcgtttccaaggtacggatcgtcaggtgcgtgggctg
gtgatgaatgcgttgcgtaatctgccggaaggtgagattgccgtcgaccgtaagtcgctt
gaacgattgtggaatgatcatatccaacttgaccgttgcatcgcgtcgttggatgaggat
ggtcttattgagattctgccgaatgcggatgtgcgtcttccggtatga
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integrated database retrieval system
