Blastococcus sp. PRF04-17: MVA48_01910
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Entry
MVA48_01910 CDS
T08406
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MVA48_01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blap03400
]
MVA48_01910
DNA repair and recombination proteins [BR:
blap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MVA48_01910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
UOY02167
LinkDB
All DBs
Position
374900..375919
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AA seq
339 aa
AA seq
DB search
MRSIWRGAVSFGLVSIGVKLYSATEDKDIRFHQVHATDGGRIKYRRVCSIDGEEVEYSDI
AKGYELPDGQVVILTDEDFDDLPLSTRREIDVLQFVAQDEIDPIQFEKTYYLEPDGPATR
PYVLLRDALENAGQVAITKIAIRQRESLAALRVRDGVLVLHTMRWPDEIRTPDFGFLDED
ITVRPQELKMAEALIASMTGEFDPTEFTDDYREAMTALLEAKQTGGEVAQVPEVEDTGGA
VVDLMSALRRSVERARGGPADDIADDSSDDVQEPAAATKAPAKKAAPAKKAALAKKAAPA
KKAAPAKKAAAEKPAAKKTTAAKKTAADKPPAKRARRSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgatctggcgcggggccgtgtcgttcggcctggtcagcatcggcgtgaagttg
tactcggccaccgaggacaaggacatccgcttccaccaggtgcacgccaccgacggcggc
cggatcaagtaccggcgggtctgctcgatcgacggcgaagaggtcgagtacagcgacatc
gccaagggctacgagctgcccgacggccaggtggtcatcctcaccgacgaggacttcgac
gacctgccgctgagcacccggcgcgagatcgacgtcctccagttcgtcgcccaggacgag
atcgaccccatccagttcgagaagacctactacctcgagcccgacggcccggcgacccgc
ccctacgtgctgctgcgcgacgccctggagaacgccggccaggtcgcgatcaccaagatc
gccatccgccagcgcgagtcgctcgcggcactgcgggtccgcgacggcgtgctggtcctg
cacacgatgcgctggcccgacgagatccggaccccggacttcgggttcctcgacgaggac
atcaccgtccgcccgcaggagctgaagatggccgaggccctgatcgcgtcgatgaccggt
gagttcgacccgaccgagttcaccgacgactaccgcgaggccatgaccgcgctgctcgag
gccaagcagaccggcggcgaggtcgcccaggtgccggaggtggaggacaccggcggtgcg
gtcgtcgacctgatgagcgccctgcggcgcagcgtcgagcgggcccgtggcggtccggcc
gacgacatcgcggacgactcctccgacgacgtccaggagccggccgccgcgacgaaggcg
ccggccaagaaggccgccccggccaagaaggccgccctggccaagaaggccgccccggcc
aagaaggcggctcccgcgaagaaggcggcggccgagaagccggcggcgaagaagacgacg
gcggcgaagaagaccgccgcggacaagccgccggccaagcgcgcccgccgcagcgcctga
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