Bacillus licheniformis DSM 13 = ATCC 14580: BLi03533
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Entry
BLi03533 CDS
T00200
Symbol
helD
Name
(GenBank) DNA 3'-5' helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bld
Bacillus licheniformis DSM 13 = ATCC 14580
Pathway
bld03420
Nucleotide excision repair
bld03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLi03533 (helD)
03430 Mismatch repair
BLi03533 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bld03400
]
BLi03533 (helD)
Enzymes [BR:
bld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLi03533 (helD)
DNA repair and recombination proteins [BR:
bld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLi03533 (helD)
MMR (mismatch excision repair)
Other MMR factors
BLi03533 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
PhoH
nSTAND3
DEAD
AAA_16
SLFN-g3_helicase
ExbD
DUF1847
Motif
Other DBs
NCBI-ProteinID:
AAU42359
LinkDB
All DBs
Position
complement(3374284..3376614)
Genome browser
AA seq
776 aa
AA seq
DB search
MQENGQEWLEEEKRIRLVLKELDQKLHSLKGKTGGLKEDIIDLRKHFWSDVTVNIADENE
AVETFFSIKQQAEVLAERERSHKQFYSQLKNLLKVKESPYFGRVDFLEDGEENAESVYIG
LASLMYEKEERFLIYDWRAPISSLFYNYGPGAAQYEVPDETVRGTIELKRQFLFKNGQLK
AMFNTDMAIGDEVLQEVLGQQADIQMKSIVATIQKEQNQIIRNEKSRFLIVRGAAGSGKT
SAALQRAAYLLYRGRGQIESSQMLLFSPNLLFNSYVANVLPELGEENIQQTTFQEFVARR
LGKQVPCETPFDQLEYCLTASDGEEQRIRMKSIELKSSLAFKGIIDDYVKYLAKGHLVFK
HITFRGKRIITSGQMRKFFAALDHSDTLSNRIEQTGKWLLQLLNKYERQERKKDWVIEES
ELLDKEEYLKAYKRLQEEQRFTENTFDDYERERNLLASIVAEREFKPLKQVVKAFGFIDF
KGTYLQLFSGRYTPQTRPDDWQSICTFTQKSFRFEKLLYEDAVPFLYMKNKLKGGGKNTA
IRHLFIDEAQDYTPFQLAFLESLFPACSITMLGDLNQAILAHAYHDKTLLSGGVFEGEKT
EIITLKRSYRSTKEIVELTKRIIEGGEEIEAFNRNGKKPTLTISADPHAHHKEMASLMTA
LQKEGLETIAVICKTVRECRDAFQHLQQHAELKLIDKETRTFQKGVVVIPVYLAKGIEFD
AVIIYDASEKQYKKERERTLFYTACTRAMHELHLFSIGKETHFLNGVPNDMYTRRE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggaaaacggtcaggaatggctggaagaggaaaaacgaatccggcttgttttaaag
gaattggatcaaaagcttcattctctaaagggaaaaaccggcggattgaaggaggatatc
atcgatttacggaaacatttttggagcgatgtcaccgtaaacatagccgatgaaaatgaa
gcggttgaaacattttttagcattaaacagcaggctgaggttttggctgagagggaaagg
agccataagcagttttacagccagctgaaaaacctgttaaaagtgaaagaatcgccttat
ttcggccgcgtagattttttggaggacggcgaagaaaacgctgagtccgtctacatcgga
ctcgcctctttaatgtatgaaaaagaagagcggtttttgatctatgattggagagcgccg
atttccagtctgttctataactatggacccggcgcggctcaatacgaagttccggacgag
acggtcaggggaacgattgagctgaaaaggcaatttctcttcaaaaacggacagctgaaa
gcgatgtttaatacggatatggcgattggggatgaagtccttcaggaagtgctggggcag
caggccgatatccagatgaaaagcatcgtcgcgacgattcaaaaagaacagaatcagatc
attcggaacgaaaagagccgctttttaattgttcggggagcggctggcagcggaaaaacg
tcggcggcattgcagcgggccgcatatttgctgtaccgcggccgcgggcagatcgagtcg
agccagatgctgctattctctccaaacctgctttttaacagctatgtcgccaatgttctg
cctgagctcggagaggaaaacatccagcagacgacgttccaggaatttgtagcgcgccgc
cttggaaagcaggtaccatgcgagactccgttcgatcagcttgaatattgtttaaccgct
tcagacggtgaggagcagcgcatccggatgaaatcgattgaattgaaatccagtctggct
ttcaaaggcatcatcgatgattacgtcaaatatttggcaaaagggcacctggtgtttaaa
catatcacctttcgcggaaaaaggatcatcacaagcggtcagatgcggaaatttttcgcg
gcccttgatcattcagacacgctgtccaaccggattgaacaaacgggaaaatggctgttg
cagctcctgaataaatatgaacgccaggaaagaaaaaaagactgggtcatcgaagaaagc
gagctgctggataaagaggaatacttaaaggcttataaacgtcttcaggaggaacagcgc
tttacggagaatacgtttgacgattatgaaagggagcgaaacctccttgcctccatcgtt
gccgaaagggagttcaagccgctcaagcaagtggtaaaagcgttcggctttattgatttt
aaaggaacataccttcagcttttttccggacgctataccccgcaaacgcgccctgatgac
tggcagagcatttgcacattcactcagaaaagctttcgttttgagaagctgctttatgaa
gatgccgtcccttttttatatatgaaaaacaagctgaaaggcggggggaaaaacacggca
atccgccatttattcattgatgaagcccaggattacacgccttttcaacttgcttttttg
gagagcttgtttcccgcgtgcagcatcacgatgctgggagacttaaaccaggcgattctt
gcccatgcctatcacgataagacgcttctgtcgggaggcgtgtttgaaggcgaaaaaacg
gagatcatcaccttgaagcgcagctacaggtcgacgaaagaaattgttgaattgacaaag
cgcatcatcgaagggggcgaagagatcgaagcttttaataggaacggcaaaaaaccgact
ttgacaatatcagccgatcctcatgcacaccataaagagatggcttcccttatgaccgcc
cttcaaaaagaaggacttgagacgattgcagtcatctgtaaaacagtccgggaatgcagg
gatgcgttccagcatcttcagcagcatgcagagcttaaactgatcgataaagaaacgaga
acgtttcaaaaaggcgtggtcgtcattcccgtctatttggcgaaagggatcgaatttgat
gccgtcatcatttatgacgcttctgaaaagcaatacaaaaaggaaagagagcggacttta
ttttatacggcgtgcacgagggcgatgcatgagctgcacctcttttccattggaaaagaa
acgcattttttaaacggcgtcccaaatgatatgtacacgagaagagagtga
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integrated database retrieval system
