Bifidobacterium longum subsp. infantis ATCC 15697 (JGI): Blon_0961
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Entry
Blon_0961 CDS
T00794
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bln
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Brite
KEGG Orthology (KO) [BR:
bln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bln03032
]
Blon_0961
03400 DNA repair and recombination proteins [BR:
bln03400
]
Blon_0961
Enzymes [BR:
bln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Blon_0961
DNA replication proteins [BR:
bln03032
]
Prokaryotic type
DNA Topoisomerases
Blon_0961
DNA repair and recombination proteins [BR:
bln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Blon_0961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACJ52060
UniProt:
B7GQI0
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All DBs
Position
1135934..1138252
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AA seq
772 aa
AA seq
DB search
MPKEEYGAKDLAVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGFCNDIV
VTLHTDGSVEVADNGRGIPVDKEPKTGLSGVEVVLTKLHAGAKFGNSSYNAVGGLHGVGS
SVVNALSSRLDVEVDRDGKTHHMTFHQGHPGVYTDADPANPSPDSPFKRTRKNRPTELEI
IGKVSPKTTGTRIRYWYDPEIFNKTAEFSYEQLIDRVRQTSFLVPGLKITIIDENVPETA
ATDTVEAADTATVEPVQEQVPALDVSSNDAELFGDSTETQVDSTGSLTEENFSLTASDQV
VDGAFGEQPAHPRVVEFLHTGGVKDFVDFLSKGEPISDIWRIQGEGTYKEETQAVGEGGE
LHAQEIERTCGLDIALRWVNGYDTTIMSFVNIVETPGGGTHVDGFMNAITKQIRKAVEDN
ARKLKVNMKDSAMKVERDDIQAGLVAVVTARVAEPQFQGQTKDVLGTAQVKPIVTRLTDK
QFGEMITGSKRGYKEQSGRVLEKIVGEMHARIQSRKAKEVTRRKNALESASMPAKLSDCQ
PGNDDVAELFIVEGDSALGTAKAARNAGFQALLPIRGKILNVQKASITQMLSNKECAAII
QVVGAGSGQSFDIEQSRYHKIIMMTDADVDGAHIRILLLTLFYRYMRPLIEHGYVYAAVP
PLHRIALTGSHKGEYIYTYSDDELAGKLADLDKKHIGYNDDIQRYKGLGEMDADQLADTT
MDPRTRMLRRIRMEDAAQASEIFSLLMGDDVPPRKQFIVDNADDFDRSKIDT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaagaatacggcgccaaggacctagctgttcttgagggcttggatgcggta
cgcaagcgtccgggcatgtacatcggcaccaccgactcgcaggggcttatgcactgcttg
tgggagatcatcgacaactccgtggatgaggccttggccggcttctgcaacgatatcgta
gtcaccttgcacaccgacggttccgtggaagttgcggacaatggccgaggcattccggtg
gataaggaaccgaaaaccggcctgtccggcgtggaggtcgtactgaccaaactgcacgcc
ggtgccaagttcggcaattcgtcttataacgccgtcggtggcctgcacggcgtgggctcc
tccgtggtcaatgccctgagctcccgactggacgtcgaagtggatcgtgacggcaagacg
caccacatgaccttccaccaaggtcaccctggcgtatacacggatgccgacccggccaat
ccgtctcccgattccccgttcaagcgcactcgcaagaaccgacccaccgagctggaaatc
atcggcaaggtatctcccaaaaccactggtacccgtattcgctactggtatgatccggag
atcttcaacaaaaccgccgagttctcatacgaacagctcatcgaccgcgtgcgtcagacc
agcttcctggtgcccggcctcaaaatcaccatcatcgacgaaaacgtacccgaaacggcg
gcgactgacaccgtcgaggccgctgataccgccacagtcgaacccgtgcaagagcaggtg
ccggctttggacgtctcgtccaacgatgccgaactcttcggcgactccaccgaaacccaa
gtcgacagtaccgggagcctgaccgaggagaatttctcactgacggccagcgaccaggtc
gtcgacggcgcgttcggcgaacagcccgcgcacccgcgcgtcgtggaattcctgcacacc
ggcggcgtcaaggacttcgtcgacttcctgtccaaaggcgagccgatctccgacatctgg
cgcatccaaggcgagggcacctataaggaggagacccaggccgtgggtgagggcggcgaa
ctgcacgcccaggaaatcgaacgcacctgcggcttggacatcgccctgcgatgggtcaac
ggctatgacaccacaatcatgagcttcgtgaacatcgtggagacgcccggcggcggtact
cacgtggacggtttcatgaacgccatcaccaagcagattcgcaaggcggtggaagacaac
gcccgcaagctcaaggtgaacatgaaggactccgccatgaaggtggagcgcgacgatatc
caagccggactcgtggccgtggtcaccgcacgcgtggccgaacctcagttccaaggccag
accaaggatgtactcggcaccgcgcaggtcaagccgatcgtcacccggctcaccgacaag
caattcggtgagatgatcaccggctccaagcgcgggtacaaggaacaatccggccgcgtg
ctggagaaaatcgtcggcgaaatgcacgcacgcatccagtcgcgcaaggccaaggaggtc
acgcgccgcaagaacgcgctcgaatccgcctcgatgccggccaaactctccgactgccag
ccgggcaatgacgacgtggccgaactgttcatcgtcgagggtgattccgcactcggtacc
gccaaagccgcacgcaacgccggtttccaggcactgctgccgattcgaggcaagatcctg
aacgtgcagaaggcgtcgatcacgcagatgctctccaacaaggagtgcgcagccatcatc
caggtggtgggcgccggctccggccagagctttgacatcgaacagtcgcgctaccacaag
atcatcatgatgaccgatgccgatgtggatggtgctcatatccgtatcctgttgctgacg
ctgttctaccgatacatgcgtccgctcatcgaacacggctacgtgtatgccgcagtgccg
ccgctgcaccgcatcgcgttgaccggctcgcacaagggcgaatacatctacacgtattcc
gatgacgagctggccggcaaactggccgacctcgacaagaagcacatcggatacaacgac
gacatccagcgatacaagggtctgggcgagatggacgccgaccagctggcggacaccacc
atggacccgcgcacgcgcatgctgcgccgcatccgtatggaggacgccgcccaggcatcc
gagattttcagcctgctgatgggcgacgacgtgccgccgcgcaagcagttcatcgtcgac
aacgccgacgatttcgatcgctccaagatcgatacctga
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