Salinivirga cyanobacteriivorans: L21SP5_03798
Help
Entry
L21SP5_03798 CDS
T04172
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq00300
Lysine biosynthesis
blq00470
D-Amino acid metabolism
blq01100
Metabolic pathways
blq01110
Biosynthesis of secondary metabolites
blq01120
Microbial metabolism in diverse environments
blq01230
Biosynthesis of amino acids
Module
blq_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L21SP5_03798 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L21SP5_03798 (dapF)
Enzymes [BR:
blq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
L21SP5_03798 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Asp_protease_2
gag-asp_proteas
Motif
Other DBs
NCBI-ProteinID:
ALO17391
UniProt:
A0A0S2I4W5
LinkDB
All DBs
Position
complement(4614968..4615747)
Genome browser
AA seq
259 aa
AA seq
DB search
MLQKFHKYHGAGNDFVLIDITENNAIKLTQKDIATICHRRFGVGADGLITLGPSDNSDFK
MTYYNSDGLEGTMCGNGGRCAVQFAYDRGMAGKKTTFDAVDGLHKGVITDDEEVNLMMQN
IGEIKNTPFGMFADTGSPHLVIEAENLQKLDVKTEGEKLRHDDYFYPDGVNVNYYQIIDN
VIHIRTFERGVEAETWACGTGSVATAVIAHHKKQFDSNSIKVQALGGQLTISFEFNGRYE
NLWLKGPAQKVFEGYDFIK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaaaatttcataaataccatggagccgggaacgactttgttttgattgatatt
acagagaacaacgcaataaagttaacacaaaaagatatagcgacaatttgtcacagaagg
tttggcgtgggtgcagatgggctaattacgctagggccatcagataattcggactttaaa
atgacctattacaattctgacggacttgaaggcaccatgtgtggaaatggcgggagatgt
gcagtacaatttgcctatgatcggggtatggcaggcaaaaaaaccacattcgatgcagtg
gatggcttgcacaaaggagtgattaccgatgatgaagaggtgaaccttatgatgcaaaat
ataggtgaaattaaaaatacgccttttggcatgtttgcagacactggctcaccgcacctg
gtaattgaagcagaaaatttacaaaaactggatgtaaagaccgagggtgaaaagctacga
cacgacgactatttctatccggatggcgtaaatgtgaattattaccaaattatagataat
gttattcatattcgcacatttgaaagaggtgtagaagctgaaacctgggcatgcggcaca
ggaagtgttgccacggcagtgattgctcatcacaaaaagcagttcgactcaaattctata
aaagtccaggctctgggtggtcaattgaccataagttttgaatttaatggccgatacgaa
aatttatggctgaaagggccggcacagaaagtatttgaaggttatgatttcattaagtaa
DBGET
integrated database retrieval system