Bartonella machadoae: LNM86_01465
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Entry
LNM86_01465 CDS
T08469
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bmac
Bartonella machadoae
Brite
KEGG Orthology (KO) [BR:
bmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmac03016
]
LNM86_01465
Enzymes [BR:
bmac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LNM86_01465
Transfer RNA biogenesis [BR:
bmac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LNM86_01465
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UNE54599
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All DBs
Position
296559..297185
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AA seq
208 aa
AA seq
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MTEIRVHQGDLPNLENYQRDSVAIDTETLGLQPYRDRLCVVQLSSGDGTADIIQIAKGQK
SAPNLVKLLEDKAITKIFHFGRFDLAILAHTFGVMPEVVFCTKIASKLTRTYTDRHGLKE
ICSELLNINISKQQQSSDWAAETLSRAQIEYAASDVLYLHRLRDIFEERLRREEREHVAK
ACFQFLPVRAKLDLLGWSEVDIFAHGSV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatccgcgtccatcaaggtgatttaccaaatttagagaattatcaaagagat
tctgttgcgattgatactgaaactctgggattacaaccataccgagatcgtttgtgtgta
gttcagctttcttctggagatggtactgctgacattatacagattgcgaaagggcagaag
agtgctcccaatttggttaaattacttgaagataaggccatcaccaagatatttcatttt
gggcgttttgatcttgctattttagcacatacatttggcgttatgcctgaggtggttttt
tgcacaaaaattgcttcgaaactcacacgtacctacacggatcgtcatggattaaaggaa
atttgtagcgaattactcaatataaatatttctaaacagcagcaatcttcagattgggca
gcagaaactttatcacgtgcgcaaattgaatatgctgcatcggatgttttatatttgcat
cgtttaagagatatctttgaagaacgtttaagacgtgaagagcgcgaacatgttgcaaag
gcatgttttcaatttttgccagtgagggcaaaacttgatcttttgggatggtcagaggtt
gatatcttcgcgcatggttcagtttag
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