Bermanella marisrubri: HF888_10855
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Entry
HF888_10855 CDS
T06527
Symbol
mnmC
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmar03016
]
HF888_10855 (mnmC)
Enzymes [BR:
bmar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
HF888_10855 (mnmC)
Transfer RNA biogenesis [BR:
bmar03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HF888_10855 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox_2
FAD_binding_2
Thi4
GIDA
Pyr_redox
FAD_oxidored
FAD_binding_3
HI0933_like
Lycopene_cycl
Pyr_redox_3
3HCDH_N
ApbA
Trp_halogenase
HcgC
MurD-like_N
AlaDh_PNT_C
TrkA_N
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
QIZ84683
LinkDB
All DBs
Position
2338113..2340101
Genome browser
AA seq
662 aa
AA seq
DB search
MIKPAQITWSDDTPISTEFDDVYFSKASGLDETRYVFIKQNHLPERWANHPVSQFTIAET
GFGTGLNFLCAWQQWLKQSSEGQTLHFTSVEKFPLQKADLVTALNKWPELSPLANTLCDF
YPELVPGWHSIHLPTPTELQHSSTGEVVLHLYFGDIHDWLSETTARVDAWFLDGFAPAKN
PEMWQPKLFSQMARLSYANTTVATFTAAGLVKRGLKGAGFKVEKAKGFGKKRDMLVANYQ
ATIGPVLPNYLTQPPWFCVPQNQTPKNVIIVGAGIAGCSTAYSLAKRGYKVTLIEKQEGI
AMGGSGNAQGVIYAKLPVKFTTQSDFYLSGYLYSLRVLKQTLGEPQRINRQQQWDDCGVL
QLALNEKEQQRQIKFENNHDLQSIIARVSAEQASKIAGIHLKHEGLWFKNGAWVYPKAWC
DALIKHENISLITKCTVEDIQYGNGQWQIHCSVDREKTTIKGNNLVICNAYEAKKLNALS
FLPTKAMAGQVSQAKQNSLTLNTVLCGDSYVTPIHDGRINFGASYRVNSTATEIRAEDTD
HNLKSLMDNFPAVAEQIDVALGGRASVRCSTPDYTPIVGAVCEPESFFRDFEPLRKNKKW
RFRQPATFYPNLYLNLGHGSRGLSTAPLCAELVAAQMNSEPWPLQTSTAEILSPNRFLVN
LL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacccgctcaaatcacatggtctgatgatacaccgatttctacagaattcgat
gacgtctatttttccaaagccagtggtctggatgaaacccgctacgtatttatcaagcag
aaccacctaccagagcgctgggcgaaccaccctgtgagccaatttaccattgccgaaaca
gggtttggtacaggtctaaattttttatgtgcttggcagcaatggcttaaacaaagcagc
gaaggtcaaactctccactttaccagtgttgaaaagttccctctgcaaaaggcagactta
gtaacagcactgaacaaatggcctgagctttctcccctagccaacacactttgtgatttt
tacccggaactggttccgggctggcacagcattcacttacccacgcctactgaactccaa
cattcaagcacaggggaagtggttttacacctatactttggtgacatacacgattggtta
tctgaaaccaccgctcgagtagatgcatggttcttagacggctttgcccctgcaaaaaac
cctgagatgtggcaacccaaactcttctctcaaatggcgcgattaagttacgccaatacc
acagtagccacatttactgctgctgggttagtaaaacgtggtttaaaaggcgctggattc
aaagtagaaaaagcaaaaggctttggtaaaaaacgcgacatgctcgtagcaaattaccaa
gcgactataggccctgtgttgccgaactatctaacgcagccaccttggttttgcgtaccg
caaaaccagacaccaaaaaatgtgatcattgtaggagccggtatcgcaggttgcagcacg
gcttatagcttggcgaagcgtggatacaaggtcacgttaattgaaaaacaagaaggcatt
gccatgggcggctcgggcaatgcgcaaggtgtaatctacgccaagcttcccgtgaaattc
actacccaaagtgatttttatctatctggttatttatattctcttcgagtactaaaacag
acactaggtgagcctcagcggatcaatagacagcagcaatgggacgactgcggcgtatta
caattagcgttaaacgagaaagagcagcaacgacaaataaagtttgaaaataatcatgac
ctgcaaagcatcattgctagggtaagcgcagagcaagctagcaagattgccggtatccat
ttaaaacatgaagggctttggtttaaaaatggcgcatgggtctatccaaaggcttggtgt
gatgcactgatcaagcatgaaaacatctctctcattacaaaatgcacggtcgaagatatt
caatatggtaatggacagtggcagatccactgttcagtcgatagagaaaaaacaaccatt
aaaggtaacaacctcgtaatctgcaatgcttatgaagcaaaaaaattaaacgccctatcc
ttcctaccgaccaaagcaatggcgggccaagtaagccaagctaaacaaaactcattaaca
ctgaataccgtattgtgtggcgatagctacgtaacacctatacacgacggcaggattaat
tttggtgccagctacagagtcaacagtacagctactgaaatccgcgcggaagacactgat
cacaatttaaaaagcttaatggacaactttcctgccgtagcagaacaaatcgatgttgcg
ctgggaggccgagccagcgtgcgctgcagcacgccggactacacccccatcgtcggcgcc
gtttgcgaacccgaatcgttctttagagattttgaaccattaagaaaaaacaagaaatgg
cgttttagacaacccgcaacgttttacccaaacctatatttaaatctagggcacggctcc
cgtggtttaagcaccgcgcctttatgtgcggagctggttgcagctcaaatgaacagcgaa
ccctggccattgcagacaagcacagcagagatcctaagtccgaatcggtttttagtgaat
ctgctttaa
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