Borrelia maritima: DB723_01130
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Entry
DB723_01130 CDS
T07005
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmat
Borrelia maritima
Pathway
bmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DB723_01130 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmat03021
]
DB723_01130 (rho)
03019 Messenger RNA biogenesis [BR:
bmat03019
]
DB723_01130 (rho)
Transcription machinery [BR:
bmat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DB723_01130 (rho)
Messenger RNA biogenesis [BR:
bmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DB723_01130 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
Spore_III_AA
AAA
DUF5091
AAA_22
DUF1269
OB_RNB
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QFI14367
UniProt:
A0A5J6WCD6
LinkDB
All DBs
Position
complement(234311..235858)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNGGFDLEGEIRRLDVSKELKIEDNSKKKVIKVVAKKDSTYSLTKSAGLSGTKDSNG
VVLSEFDYDISASGLENNIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKVVEGLGTN
HTIAVTMKKTELIFLLVKILSENNIDVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaatggtggatttgatttagaaggtgaaataaggcgattggatgtttct
aaagagttgaagattgaagataattcaaaaaaaaaggtaattaaagttgttgctaaaaag
gattctacatatagcttgacaaaatctgcaggtttaagtggtacaaaggattcaaacggt
gtagtactttctgagtttgattatgatatttctgcttctggtttagaaaataacattaaa
actttagagcaaagtaatatcatcaagttttttaatggtaaagattatgtagagattgaa
aaactttatgataagccaattacagaggttagaaaagttgttgaagggcttgggaccaat
catactattgctgtaacaatgaaaaaaacagaattaatatttttattggtaaaaatatta
agtgagaataatattgatgttttatttacaggcgtgcttgatgttcttagtgatggttat
gggtttttgagaacggcatcgaattcttatctttcaggagggaatgatgtttatgtctct
ccttctcagattagactttttaatttaagaacgggagatattttatatggccaaattaga
tcgcctagagatggtgagagattttttgctatggttaaaattaaatctattaataatcaa
gatcccacgtttgctcaaaacagaataccttttgataatttaactcctctttatcccaat
attaaattgaatcttgaatatgaaaattgtaatatttctacaaggcttattaatcttttt
tcacctataggtaaggggcaaagggctttaatagtctctcccccaaaagcgggaaagacc
actttgctccaaaaaatagctaatgcaataactactaattattcggatgttattttgatg
atattgcttattgatgagagaccagaagaagttacagatatgattcgtagtgtcaaaggt
gaagtaattgcatctaattttgatgagcaagctagcagacatgtccaggtggcagaaatg
gttattgaaaaggcaaaaaggcttgttgaaaacaaaaaagacgttgttattttgcttgat
tctattacaaggcttgcaagggcatataatcaaactatgccaacttctggcaagattttg
tcaggcggagtagattctaatgctttacataagccaaagagattttttggatctgctaga
aatattgaagaaggggggagtttaactattatagctactgctttggttgatactggtagt
aaaatggatgaagttatttttgaagaatttaaaagtactggtaatatggaattaattctt
gatagaagtttggcagacagaaggctttttcctgctattaatattaaaaaatcagggaca
agaaaagaagagttacttcttagtgaagaggagcgttctaaaattttacttattagaagg
atactcgggggtgttgatgattatgagggagttgaagttctaatagaaaagatgaaaaaa
agtaaaaataatgaaatttttttaaagacaatgagcaatggtaattaa
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