Bacillus mojavensis: HC660_14090
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Entry
HC660_14090 CDS
T07122
Symbol
ligV
Name
(GenBank) ATP-dependent DNA ligase subunit Ku, AP/deoxyribose 5'-phosphate (5'-dRP)-lyase
KO
K10979
DNA end-binding protein Ku
Organism
bmoj
Bacillus mojavensis
Pathway
bmoj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HC660_14090 (ligV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmoj03400
]
HC660_14090 (ligV)
DNA repair and recombination proteins [BR:
bmoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HC660_14090 (ligV)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
DUF1631
Motif
Other DBs
NCBI-ProteinID:
QJC95885
UniProt:
A0A6H2JPN5
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All DBs
Position
complement(1416787..1417671)
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AA seq
294 aa
AA seq
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MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIKYEKICTNCEKTLSPDEI
VKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQEIDPIYFNRSYYVGPGDNGT
KAYTLLREALRSTGKIGIANMTIRSKQQLAILRVYENCIVMESIHYPDEVRSAAHVPGVP
DQSNVNDKELQTAITLIDELTTEFQPEQYEDTYRKALLQRVNDKLENKETAVTPDKAPPR
EDVIDLVSALQASIDRTKRPNREKPAAAPAEGGEPKGAGEKKQKTTRKKVSGTS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaagggatccatcagcttcggtttggtgaatatccccatcaagctt
tatgccgccacagaagataaagacattaagctgcgaagtcttcataaagaagatcatgcg
ccaattaaatatgaaaaaatatgcacaaactgtgaaaaaacgctcagccctgatgaaatt
gtgaagggatatgaatacgtaaaaggaaaatatgtcgtgctgactgatgaagatttaaaa
agcttaaagcaggagcatgaagagaaagcggttgaaattgtcgattttgttcaactgcag
gaaatagacccgatatattttaaccgttcctactatgtcgggcccggtgataacggcacg
aaagcctatactcttcttcgcgaggcgcttcgatccaccggaaagatcgggatcgccaat
atgacgattaggtcgaaacagcagcttgccattctccgcgtatatgaaaattgcatcgta
atggaatccattcattatcccgatgaggtaagaagcgctgcccacgtacccggagtgcct
gatcaatcaaatgtaaatgataaagagctgcagaccgccattacgttgatagatgagctg
acaactgaatttcagccagaacaatatgaggacacgtatcgaaaagccttgctgcaaaga
gtcaatgataagctggagaataaagaaacagccgttactcctgacaaagcgcctcctcgt
gaggatgtgatcgacctggtcagcgcacttcaagccagcatcgatcgaaccaaaaggccg
aatcgggaaaaaccagcggcagcaccagccgaaggcggagaaccgaaaggagccggagaa
aaaaagcagaaaaccactagaaaaaaagtctccggcacatcatag
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