Burkholderia multivorans ATCC BAA-247: NP80_5659
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Entry
NP80_5659 CDS
T03881
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmul
Burkholderia multivorans ATCC BAA-247
Brite
KEGG Orthology (KO) [BR:
bmul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmul03032
]
NP80_5659
03400 DNA repair and recombination proteins [BR:
bmul03400
]
NP80_5659
Enzymes [BR:
bmul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NP80_5659
DNA replication proteins [BR:
bmul03032
]
Prokaryotic type
DNA Topoisomerases
NP80_5659
DNA repair and recombination proteins [BR:
bmul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NP80_5659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AJY14980
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All DBs
Position
3:505241..506320
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AA seq
359 aa
AA seq
DB search
MKPRAPRSAAGDGMRMSDARAAATLRHVDDRQPGYTRRRVRNGFAYYTQDGERIRDPDEI
ARINALAIPPAYTDVWICADPRGHLQATGRDARGRKQYRYHPQWRATRDANKYARMAAFA
LALPRIRARVARDLARPGMPREKVVATIVRLLDTTLARIGNAEYARENESYGLTTLRKRH
LKIESGQVRLRFVGKSGVEHDVTVDDPRVARIVRRCAELPGHELFQYVDDDGERHSIGSA
DVNDYLREVAGAEFTAKDYRTWAGSVQALALLRRAPHGGVTEARKQIVETVRAVADMLHN
TPAVCRRCYIHPDVLEMYESGRLDTLVIRRAPRGLRADEAAFAALVAGAARRAAKTARS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcgcgcgccccgctccgcggccggcgacggcatgcgcatgtccgacgcgcgc
gcggccgccacgctgcgccacgtcgacgaccggcagccgggctacacgcgtcgtcgcgtc
cgcaacggcttcgcgtattacacgcaggacggcgaacggatccgcgatccggacgagatc
gcgcggatcaacgcgctcgcgattccgcccgcgtacaccgacgtctggatctgcgcggac
ccgcgcggccatctgcaggcgaccggccgcgacgcgcgcgggcgcaagcagtaccgctac
cacccgcagtggcgggcgacgcgcgacgcgaacaagtatgcgcggatggccgcgttcgcg
ctcgcgctgccgcgcatccgcgcacgcgtcgcacgcgacctcgcgcgaccggggatgccg
cgcgagaaggtcgtcgcgacgatcgtccggctgctcgacacgacgctcgcgcgcatcggc
aacgcggaatacgcgcgcgagaacgagtcgtacgggctgacgacgctgcgcaagcggcat
ctgaagatcgaatcggggcaagtgcggctgcgcttcgtcggcaagagcggcgtcgagcac
gacgtgacggtcgacgatccgcgcgtcgcgcgaatcgtgcggcgctgcgcggagctgccg
ggacacgagctgttccagtacgtcgacgacgacggcgaacgccattcgatcggctcggcg
gacgtgaacgactatctgcgcgaggtcgccggcgcggaattcaccgcgaaggactaccgg
acctgggccggcagcgtgcaggcgctcgcgctgctgcgccgcgcgccgcacggcggtgtc
acggaggcccgcaagcagatcgtcgagaccgtgcgcgcggtcgccgacatgctgcacaac
acgccggccgtgtgccggcgctgctacatccaccccgacgtgctcgagatgtacgagtcg
gggcggctcgatacgctcgtgatccggcgcgcgccgcgcgggctgcgcgccgacgaagcg
gcgttcgcggcgctcgtggccggtgcggcgcggcgcgccgcaaaaaccgcgcgcagttag
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