Peribacillus muralis: ABE28_007120
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Entry
ABE28_007120 CDS
T05340
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bmur
Peribacillus muralis
Pathway
bmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE28_007120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmur03019
]
ABE28_007120
Messenger RNA biogenesis [BR:
bmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABE28_007120
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
DUF4453
CBAH
Motif
Other DBs
NCBI-ProteinID:
AOH54119
UniProt:
A0A1B3XLM6
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All DBs
Position
complement(1479702..1481372)
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AA seq
556 aa
AA seq
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MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSYL
EKNVDKIKGVFITHGHEDHIGGIPYLLRKVNVPVYGGKLALGLLRNKLEEHGLLRQTTMI
EISEDEVIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEVQNFTMSESRVGDTIQDIFRKVDGRIIFATFASNIHRLQQ
VVEAAVANGRKIAVFGRSMDSAISIGQDLGYIVAPKDTFIDVQQLNRMPANKVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVISGPL
SDIHTSGHGGQQEQKLMLRLIKPKFFMPIHGEYRMQKLHARHAVDCGVPEENCFIMDNGE
VLSLSENTAQIAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVVVVVSINMKEFKI
ASGPDIISRGFVYMRESGDLISDAQSLITKHLNKVMDRKTTQWSEIKNEITDTLSPFLYE
KTKRRPMILPIIMEVQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtaaaaaatgatcaaacagctgtattcgccctgggcggtttaggcgaaatc
ggtaagaacacatatgcagttcagtttcaagatgagatcatcgtcattgatgctgggatt
aaatttccggaagatgaacttctcggtattgactatgtgattccagactacagctattta
gagaaaaatgtagataaaattaaaggtgtcttcatcacccacggccatgaagaccatatt
ggcgggattccatatttacttagaaaagtgaacgtccctgtatacggcgggaagctggca
cttggcttgcttcgcaataaattggaagaacacggcctgttacgccagacgacgatgatt
gaaatcagtgaggatgaagtgattaagttcaggaagacttccgtctccttcttccggaca
acccacagtattcctgattcctatggaatcgttgttaagacgccacctggacaaattgtc
catactggtgacttcaaattcgacttcactccagttggtgaaccggccaacttgaccaag
atggctgaaattggtaaagaaggtgtattgtgcttactgtcggatagcacgaatagtgag
gtccagaatttcacgatgtccgaaagccgtgtcggtgataccattcaggacattttccgt
aaggttgacggcaggatcatttttgcaacattcgcatcaaacattcaccggcttcagcaa
gtggtggaggcagcagttgcaaatggccgtaaaattgccgtttttggccgcagcatggat
tccgccatatcaataggccaagaccttggctatatcgtggcaccgaaagatacattcatt
gatgtacagcaactaaatcgcatgcctgcgaacaaagtgaccatcctttgtacagggagt
caaggtgaacctatggcagccctttcgaggattgccaatggaacacatcgtcaaatccaa
atcatccctggtgatacggtcgtattttcttcttcacctattcctggcaacacgatcagt
gtttccagaacgattaatcaattatatcgcgcaggtgcagaagtcatttcaggcccattg
agcgatatccatacatcaggtcatggcggacaacaggaacaaaagctaatgctgcgttta
atcaagccaaaattcttcatgccgattcatggtgaataccggatgcaaaaacttcatgcc
cgccatgcagtcgactgcggggttccagaggaaaactgctttatcatggataacggcgaa
gtgctttccttaagtgaaaatacagcacaaatcgctggtaaaatcccttcaggttcggtt
tacatcgatggtagcggcataggagatatcggtaacatcgttttgcgcgatcgtcgaatc
ctgtctgaagaaggtcttgtcgttgtcgttgtcagcatcaatatgaaagaattcaagatt
gcttcgggtcctgacatcatctctcgcgggtttgtatacatgagggaatcaggcgacctg
atcagcgatgcccaatccttgattactaagcatttgaataaagtgatggatcgcaagact
acacaatggtccgagattaaaaatgaaattactgatacattgtctccattcctttatgaa
aagactaagcgccgtccgatgatcctaccgatcatcatggaggtacaataa
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