KEGG   Peribacillus muralis: ABE28_007120
Entry
ABE28_007120      CDS       T05340                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bmur  Peribacillus muralis
Pathway
bmur03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABE28_007120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmur03019]
    ABE28_007120
Messenger RNA biogenesis [BR:bmur03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABE28_007120
SSDB
Motif
Pfam: RNase_J_C Lactamase_B Lactamase_B_2 RMMBL DUF4453 CBAH
Other DBs
NCBI-ProteinID: AOH54119
UniProt: A0A1B3XLM6
LinkDB
Position
complement(1479702..1481372)
AA seq 556 aa
MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSYL
EKNVDKIKGVFITHGHEDHIGGIPYLLRKVNVPVYGGKLALGLLRNKLEEHGLLRQTTMI
EISEDEVIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEVQNFTMSESRVGDTIQDIFRKVDGRIIFATFASNIHRLQQ
VVEAAVANGRKIAVFGRSMDSAISIGQDLGYIVAPKDTFIDVQQLNRMPANKVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVISGPL
SDIHTSGHGGQQEQKLMLRLIKPKFFMPIHGEYRMQKLHARHAVDCGVPEENCFIMDNGE
VLSLSENTAQIAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVVVVVSINMKEFKI
ASGPDIISRGFVYMRESGDLISDAQSLITKHLNKVMDRKTTQWSEIKNEITDTLSPFLYE
KTKRRPMILPIIMEVQ
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaaattcgtaaaaaatgatcaaacagctgtattcgccctgggcggtttaggcgaaatc
ggtaagaacacatatgcagttcagtttcaagatgagatcatcgtcattgatgctgggatt
aaatttccggaagatgaacttctcggtattgactatgtgattccagactacagctattta
gagaaaaatgtagataaaattaaaggtgtcttcatcacccacggccatgaagaccatatt
ggcgggattccatatttacttagaaaagtgaacgtccctgtatacggcgggaagctggca
cttggcttgcttcgcaataaattggaagaacacggcctgttacgccagacgacgatgatt
gaaatcagtgaggatgaagtgattaagttcaggaagacttccgtctccttcttccggaca
acccacagtattcctgattcctatggaatcgttgttaagacgccacctggacaaattgtc
catactggtgacttcaaattcgacttcactccagttggtgaaccggccaacttgaccaag
atggctgaaattggtaaagaaggtgtattgtgcttactgtcggatagcacgaatagtgag
gtccagaatttcacgatgtccgaaagccgtgtcggtgataccattcaggacattttccgt
aaggttgacggcaggatcatttttgcaacattcgcatcaaacattcaccggcttcagcaa
gtggtggaggcagcagttgcaaatggccgtaaaattgccgtttttggccgcagcatggat
tccgccatatcaataggccaagaccttggctatatcgtggcaccgaaagatacattcatt
gatgtacagcaactaaatcgcatgcctgcgaacaaagtgaccatcctttgtacagggagt
caaggtgaacctatggcagccctttcgaggattgccaatggaacacatcgtcaaatccaa
atcatccctggtgatacggtcgtattttcttcttcacctattcctggcaacacgatcagt
gtttccagaacgattaatcaattatatcgcgcaggtgcagaagtcatttcaggcccattg
agcgatatccatacatcaggtcatggcggacaacaggaacaaaagctaatgctgcgttta
atcaagccaaaattcttcatgccgattcatggtgaataccggatgcaaaaacttcatgcc
cgccatgcagtcgactgcggggttccagaggaaaactgctttatcatggataacggcgaa
gtgctttccttaagtgaaaatacagcacaaatcgctggtaaaatcccttcaggttcggtt
tacatcgatggtagcggcataggagatatcggtaacatcgttttgcgcgatcgtcgaatc
ctgtctgaagaaggtcttgtcgttgtcgttgtcagcatcaatatgaaagaattcaagatt
gcttcgggtcctgacatcatctctcgcgggtttgtatacatgagggaatcaggcgacctg
atcagcgatgcccaatccttgattactaagcatttgaataaagtgatggatcgcaagact
acacaatggtccgagattaaaaatgaaattactgatacattgtctccattcctttatgaa
aagactaagcgccgtccgatgatcctaccgatcatcatggaggtacaataa

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