Halobacteriovorax marinus: BMS_0657
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Entry
BMS_0657 CDS
T01659
Name
(GenBank) putative single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03410
Base excision repair
bmx03430
Mismatch repair
bmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BMS_0657
03430 Mismatch repair
BMS_0657
03440 Homologous recombination
BMS_0657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_0657
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BMS_0657
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BMS_0657
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BMS_0657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
CBW25564
UniProt:
E1X592
LinkDB
All DBs
Position
complement(680219..681958)
Genome browser
AA seq
579 aa
AA seq
DB search
MQTTHTTHHSQNQKPQTTPKFHPVIQRIFDKREMGPKEIAEFLSWDLKSMPSLTSMKDVQ
KASTRIIQAIENNEKIAIYGDYDVDGTTSCALLYHFFKMIDIEVGLIQPSRFIEGYGIHP
PSIDKAHEEGYKVVITVDCGITNNEAATRAKEIGIDLIITDHHKDARDEMPDAFAIVNPN
RRDEPKDSELKALAGVTVGFALAVQIREDLIAAGRKIPSLYPLLQFAAIGTICDLAKLNP
TNLKIVRHGLKQIPSTEYPGIRAFFSPEERERGFVPSEKLSFNIGPLINSKGRLDHPEKA
LQLLTIEDDKKAFEYYSHLEICNNERKFIQAEVFNSAKEQVLKNLNGSEHIVSIVYSPEW
HEGVIGIVASKLVETFKVPAIVFTNAEEKGVIKASARSAGDLNLFDCLNENADLFLKFGG
HKAAAGLSMPVENLSQFKENMLSTIAKLPAIQRTVQSYYDVEIGPEEINPRLLKELELLE
PFGMGNQKPIFKMKGFRLDNYDILKDVHVRWSLSSLNDPSTKLKGISFNYIGKWGIEDPQ
DLYNAQERNGDELTAYFTLGVNHFRGNQYIQLMIERIEL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgacacacactacacatcattcacaaaatcaaaaaccacaaacaaccccaaag
tttcatccagtgattcaaagaatctttgataagagagaaatgggcccaaaggaaattgca
gagtttctctcttgggatcttaaatccatgccctctctcacttctatgaaagatgtccaa
aaagcatcgacaagaattattcaagcgattgagaataatgagaagatagcaatttatgga
gattacgacgtagatggaacaacttcatgtgcccttctttatcacttctttaaaatgatt
gatattgaggttggtctcattcaaccgagtcgatttatcgagggctatggaatacatcca
ccttcaatcgataaagctcatgaagaaggatataaagtcgtcattactgttgactgcggt
attacaaataacgaagcagcaacaagagcgaaagagattggtattgacctcattattacg
gatcaccacaaagatgctagagatgagatgccggatgcctttgctatcgtgaacccaaat
agaagagacgagcctaaagactctgaactaaaagctcttgcaggagttactgtaggtttt
gctcttgctgttcaaatacgagaggatttaattgcagcgggtagaaagattccatccctc
tatccccttctccaatttgcggccattggaacaatttgtgacctggcaaaactaaaccct
acaaatttaaagattgtaagacatggtctaaaacaaattccatctacagaatatccagga
atacgtgcattcttctctcctgaagaaagagagagaggatttgttccgtcagaaaagcta
tcatttaatattgggccacttattaattcaaagggacgactagatcatcccgagaaggcc
ctccaattacttacaattgaagatgataagaaagcttttgagtactactctcatttagag
atttgtaataatgaaagaaagtttattcaagccgaggttttcaattccgctaaagaacaa
gttctaaaaaacctcaatggaagtgagcatattgtctcaatcgtctattctccagagtgg
catgagggagttatcggaattgttgcatctaaattagtagagacttttaaagtgccggcg
atagtatttaccaatgccgaagagaagggtgtgataaaggcctctgcaagaagtgcggga
gaccttaatctctttgattgtctcaatgaaaatgcagacctctttttaaagtttggtggt
cataaggctgccgcagggctttcaatgcctgtcgaaaacctttctcaatttaaagagaat
atgctctcaacgattgcgaagcttcctgcaatccaaagaactgtacagagctattatgat
gtagagattggtcctgaagaaattaatcctagactccttaaagagctagagcttcttgaa
ccatttggaatgggaaatcaaaaaccaatttttaaaatgaagggatttagactagataat
tatgacatcttaaaagacgtccatgttagatggtcgctaagttctttaaatgatcctagc
acaaaactcaaaggaattagctttaactacattgggaaatggggaattgaagaccctcaa
gatctctacaacgctcaagagagaaatggtgatgagctaactgcttacttcactcttggg
gttaatcattttagaggtaatcaatatattcaactcatgattgagagaatcgagttataa
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