Bacillus pseudomycoides 219298: DJ92_2188
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Entry
DJ92_2188 CDS
T03239
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bmyc
Bacillus pseudomycoides 219298
Pathway
bmyc02020
Two-component system
bmyc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DJ92_2188 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DJ92_2188 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmyc03021
]
DJ92_2188 (rpoN)
Transcription machinery [BR:
bmyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DJ92_2188 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_17
Sigma70_r4
HTH_21
HTH_3
HTH_23
HTH_38
HTH_IclR
HTH_6
Motif
Other DBs
NCBI-ProteinID:
AIK38717
UniProt:
A0A2A8H0M5
LinkDB
All DBs
Position
complement(2055322..2056629)
Genome browser
AA seq
435 aa
AA seq
DB search
MKASLLQEQSLRLAMTQELRQAITMLQYNVQELSEFLYEQSLENPLIELGGFEREKKKSS
SKSKSTSKQVNNQMEIYSVDSTTIQQHLLDQIQYYKIDEEQRKAASFIIMNMDENGYLQE
TNEELAELLAAHIDVVDCSMELVQSLEPAGVGARNIQECLSLQLKRLQKRDELAEMIVDE
HFVYFVKKDWRKLIHVMKCNNEELQSAVDCITSLQPKPGLAFSSEKPLYIVPDMAVKKDG
DRLVLQMNERNMPRIEIHSEYSALLHNSESEVASYVSEKYQHVQWIMRSLKQRKQTLLQV
MEIIMKKQRDFFWQGPEYLKPLSLKEVAEELSVHESTISRATRNKYVQTPHGLFEMKSFF
SNAVVTTEDEAVSTKRVKQLMQALVEKENKKKPLSDQKISKLLEEEHEIVISRRTVAKYR
EQMNIPASSLRKTIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggcaagtcttttacaagaacaaagcttacgtttggccatgacacaagagttaaga
caagcgattacaatgctccaatataatgtgcaggaattatcggagtttttgtatgagcaa
tcgttagagaatccccttattgagttaggcggctttgagagggagaagaaaaagagttca
agcaaaagtaaaagtacaagcaaacaagttaataatcaaatggaaatttacagtgtggat
tcgacaacgattcagcaacacttattagatcaaatacagtattataaaatagatgaagag
cagcgaaaagcagcttctttcatcattatgaacatggatgagaatggttatttacaagaa
accaatgaagaattagcagaactacttgcagcacatattgatgtagtggactgttctatg
gagcttgtccagtcattagagccagcaggggtgggagcgcgtaatattcaggagtgtcta
tcacttcaattgaagcgcttacaaaaacgagatgagctggcagaaatgattgtggatgaa
catttcgtgtattttgttaagaaagattggcggaaacttatccatgttatgaaatgtaat
aatgaagaattacaatcagctgttgattgtattacatcgcttcagccaaaaccagggctt
gcgtttagctctgaaaaaccgctttatattgttcctgatatggctgttaaaaaagacggc
gatcgtctcgttttacaaatgaatgaacgtaacatgccaaggattgaaattcattcagag
tatagtgcacttcttcataatagtgaaagtgaggttgcttcttatgtatctgagaagtac
cagcatgtgcagtggattatgcgcagtttaaagcaacggaaacaaacgcttttgcaagtg
atggaaatcattatgaagaaacaacgtgatttcttttggcaggggccagagtacttaaag
ccactctccttaaaagaagtagctgaagaactaagtgtacatgaatctacaattagccgt
gctacccgtaataaatatgtacaaacgccgcacggattgtttgaaatgaagtcatttttt
agtaacgcagtggttacaacagaagatgaggctgtttctacaaagcgtgttaaacaattg
atgcaagcgcttgtagaaaaagaaaacaagaaaaaaccactttcagatcaaaaaatttca
aaattgttagaagaagagcatgaaatcgttatttcaagaagaacggttgcgaaatatcga
gaacaaatgaatattcctgcttcttctcttcgaaaaacaattggatag
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