Brassica napus (rape): 106354736
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Entry
106354736 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106354736
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106354736
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106354736
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106354736
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106354736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
106354736
NCBI-ProteinID:
XP_013650212
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All DBs
Position
A1:3119439..3122432
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AA seq
613 aa
AA seq
DB search
MHEVGFPLDLSVLTRLIPSLFFLAVGVFYFLRNTAAKYFDIGGAAAGGFDRELVAEDCTT
KCSRCNSVRYCSEECQTSDWSSGNQRRCTEIGITTLTPSARNSLRFRASRFGDCPERDQN
KINFKPREVLFPYEEFVRYFNWDNTDLAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLE
RGHRSECMRDDWCFFCAFQTHVERASQSRYPFSPVNIISRLTNIGGTLGYGRQEDAHEFM
RYAIDTMQSVCLDEFGGEKMVPPRCQETTLVQYIFGGLLQSQVQCTVCNNVSEQYENMMD
LTVEIHGDAVSLEECLDQFTAREWLQGDNMYKCDRCSDYVKACKRLTIRRPPNVLTIALK
RFKGGRYGKLNKRISFPETLDLRPYMSQGGEGSDVYTLYAVIVHLDMLNASFFGHYICYI
KDFSGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSPLPCASLGSEVQEEKETDTL
ATKPCQKELVESSMVEAIDTSSCSSHTASEDLECEQESSSSSSSSSISSPSSPSVVTSES
CTVDGLDSDSNPWIDDDSAIDHQESVVTNGNIDGEVKNHAVGSCSDVTASVPSSCSKPRH
PVRDTDTKMIGAQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggttggctttccgctggatctctctgtcctcactcgcctgataccgtctctc
ttcttcctcgccgtcggtgtcttttacttcctcagaaacaccgccgctaagtacttcgac
atcggcggcgccgccgccggaggtttcgacagggaactcgtggcggaggattgcaccacg
aaatgctctcgctgcaattccgttcgatactgctcagaagagtgtcaaacgtcagattgg
agttcaggtaatcaaagaaggtgcacggagattgggattactaccttaacaccatctgcc
agaaacagccttaggttcagagcttcaaggtttggggattgtccggagcgagaccaaaac
aagatcaacttcaagccaagagaagttcttttcccatatgaggagtttgttagatacttt
aactgggacaatacagatttggctccctgtgggctcatgaattgtggaaacagttgtttt
gcgaatgtgattctacaatgcctatcatggacacgtcctcttgttgcatacctactagag
agaggccataggagtgaatgtatgcgtgacgattggtgcttcttctgtgcatttcaaacc
catgtcgagagagcgagccaaagccggtaccctttttcaccggtgaacatcatctcacgg
ttaactaacatcggtggaactcttggttatgggagacaagaggatgctcatgagttcatg
aggtacgcgattgatacgatgcagtccgtttgcctagacgagttcggtggagaaaaaatg
gtgcctcctcgctgtcaagaaacaacacttgttcagtatatatttggcggtctcctccag
tcacaggttcagtgtactgtctgcaataacgtctctgagcagtacgagaatatgatggat
ttaacggtcgagattcatggagatgctgtgtctctggaggaatgcctcgatcagtttaca
gccagagagtggcttcagggcgataacatgtacaaatgtgataggtgtagtgactatgta
aaggcatgtaagcgtcttacgatcaggcgccctccaaatgttcttaccattgccttaaaa
agattcaagggaggaagatacgggaaactgaacaaaagaattagttttcctgaaacattg
gatcttagaccttacatgagccaaggcggagaaggatcagatgtgtacacactctatgca
gtgattgtccatctagacatgctgaatgcatccttcttcggccattacatatgctacatt
aaggactttagcggaaactggtatagaatagatgattccgagatagagagtgtggaatta
gaagatgttctttctcaaagagcgtatatgcttctctacagcaggattcaagctcggtca
ccattaccgtgtgcgagtctcggatcagaagttcaagaggagaaggaaacagacacattg
gctacaaaaccttgccaaaaagagttagttgagagttcaatggtggaagctattgacacc
agtagctgcagcagccataccgccagtgaagaccttgaatgtgaacaagaatcatcctcc
tcctcctcgtcatcatcaatttcatcaccttcgtcaccatctgtagtgacctctgaatct
tgcacggttgatggattggattctgactcaaacccttggattgatgatgactctgcaata
gatcatcaagagtctgttgtaacaaatgggaacatagatggagaggtaaaaaaccatgcc
gtcggttcttgttcagacgttacagcttcagttccatcgagttgttcaaaaccccgacat
cctgtgagagatacagacaccaagatgatcggtgctcaatga
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