Brassica napus (rape): 106367277
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Entry
106367277 CDS
T04128
Name
(RefSeq) CSC1-like protein ERD4
KO
K21989
calcium permeable stress-gated cation channel
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106367277
Transporters [BR:
bna02000
]
Other transporters
Pores ion channels [TC:
1
]
106367277
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Peroxin-3
Motif
Other DBs
NCBI-GeneID:
106367277
NCBI-ProteinID:
XP_013662470
UniProt:
A0A816P6J1
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All DBs
Position
A9:complement(27281544..27285777)
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AA seq
722 aa
AA seq
DB search
MEFEAFLLSLGPSAFIFLVLMFLFTWLSRRPGNVSIYYPNRILKGMDPWEGSSLTRNPFA
WIREALTSSEQDVVNLSGVDTAVYFVFLSTVLGIFALSSLLILPILLPLAATDKSIKNSR
DVTDTTSKGTFSQLDNLSMANITRKSSRLWAFLGAVYWISLVTYFMLWKAYKHVSTLRAR
ALMSADTIPEQFAILVRDIPSPPNGQTHKEFIDSFFRDIYPETFYRSLVVTENRKVNKIW
EGLEGYKKKLARAEAIFAATSNRPTNKTGLLGLAGKKVDSIEYYTDLINESVAKLETEQK
KVLAEKQQTAAIVFFTDRVTAALAAQSLHSQMVDTWTVTEAPEPRQILWENLNIKFFTRL
IRQYLIYFIVAITILFYMIPIAFVSAITTLANLQKAIPFIKPVVKITFIRTVLESYLPQI
ALIIFLAMLPKFLMFLSKSEGIPSRSHAVRAASGKYFYFSVLNVFIGVTLAGSLFDNLKA
LQQKPNSIVTVLATSLPKNATFFLTYVALKFFIGYGLELSRIIPLIIFHLKKKYLYKTEA
EVKEAWYPGDLRYATRVPSDMLILTITFCYSVFAPLILVFGVIYFGLGWLILRNQALKVY
VPSYESYGRMWPHIHTRILAALFLFQVVMFGYLGVKLFVWATLLVPLIVISLIFGYVCRR
KFYSGFQHTALEVACRDLKERPDLEEIFRSFIPHSLSTHKPEDHQFKGAMSRYQDYAAIS
AA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgaagcgtttcttctgtccttagggccatcagcattcatcttcctcgttctc
atgttcctcttcacctggctttctcgtagacccggaaacgtttccatttactacccgaac
cggatcctcaaagggatggatccttgggaaggcagctccttgacccgaaacccatttgct
tggatccgtgaagctttgacttcctctgaacaagatgtcgttaatttatccggcgtcgat
actgcagtctacttcgtcttcttgagcactgttctggggatctttgctttatccagtctt
ctcatcttaccgattctactccctttagccgctacggacaagagtataaagaactcaagg
gacgtaacagacaccacaagcaaaggaacgtttagccaacttgacaatctatcaatggct
aacatcacaagaaagagttcaaggctgtgggcttttctaggagcggtttactggatatct
ctggtcacatatttcatgttatggaaagcttataagcatgtctctacattaagagctcga
gctctcatgtctgctgatacaattccggagcagttcgctattcttgttagggatatacct
tccccacctaacggacagacccataaagagtttatagattcttttttcagagatatatac
cccgagacattctacagatcgcttgtcgtcacagaaaacagaaaggttaataagatatgg
gaagggttggaaggttacaagaagaagcttgcacgtgcagaagcgatatttgcagcgact
agtaaccgaccaacgaacaaaacaggcttgcttggtctggccggaaaaaaagtagacagc
atagagtattataccgacctaatcaacgagtctgtagccaaactagagactgagcagaaa
aaggttcttgctgagaagcagcaaacagcagctattgtcttcttcaccgaccgagttact
gctgctttagccgcacagtctctacacagccagatggtcgatacatggacagtgactgaa
gcacctgagcctcgccagatcctctgggagaatctcaacatcaagtttttcactagacta
atcagacagtacttgatctacttcattgtcgcaataaccattttattttacatgatccct
atcgcgtttgtctctgcgatcaccactcttgcgaatctccagaaggctattccttttata
aagccagttgtgaagataactttcataagaaccgttcttgagtcttaccttcctcagatt
gcgctcatcatattcttggcgatgttgcctaagttcctcatgttcctctctaaatccgag
gggattccttcgcggagccacgccgttagagctgcctcggggaagtacttttacttctcg
gtcttgaatgttttcatcggtgtcacccttgcagggtctctgttcgacaacttgaaggct
cttcaacagaaacccaactccattgtaaccgttttggctactagcctccctaagaacgct
actttcttcttgacctacgttgctctcaagttctttattggctatggtcttgagctgtca
cggatcataccattgataatattccatctgaaaaagaagtatctatacaaaaccgaagca
gaggtcaaagaagcttggtacccaggagacctaagatacgcaactagggttcccagcgac
atgcttatcctcacaatcaccttctgctattctgtattcgctcctttaatcctcgtattc
ggtgttatctactttggtttaggttggctcatcctgaggaatcaggcgctgaaggtgtat
gttccatcatacgagagctatggaaggatgtggccacatattcacacccgcatactagcg
gcattgtttctgttccaagtggttatgtttggttacttgggagtcaagctattcgtttgg
gcgaccctcttggttcctctcatcgttatctctctcatcttcggatacgtgtgtcgccgg
aagttctactcaggtttccaacacacagctctcgaggttgcttgccgtgacctgaaggag
agaccggaccttgaggagatttttaggtcattcatcccacatagcttgagcactcacaaa
ccagaagatcaccagtttaaaggcgcaatgtctcgttatcaagactatgctgcaatatca
gctgcttaa
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